RNAquarium Metadata Server
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contig_metadata

11 rows where bioproject = "PRJNA745553" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA745553 · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
723979 723979 PRJNA745553_S_NODE_10461_length_375_cov_8.715232_g10266_i0 PRJNA745553 10461 375 8.715232 32.68212 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 387 8.609999999999998e-103   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g10266 i0 85.526 60.6506666666667 380 44 100 11 1 375 4037 3664 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 22744 387 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
2000195 2000195 PRJNA745553_S_NODE_19122_length_282_cov_10.789474_g18927_i0 PRJNA745553 19122 282 10.789474 30.42631668 Bodomorpha sp. HFCC56 352464 SAR_Eukaryotes SAR_Eukaryotes 505 1.6599999999999995e-138   NTclustered gi|83034974|gb|DQ211603.1| 352464 g18927 i0 98.936 98.0354609929078 282 3 100 0 1 282 301 582 Bodomorpha sp. HFCC56 28S ribosomal RNA gene, partial sequence blastn 27646 505 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC56
6302748 6302748 PRJNA745553_S_NODE_5325_length_493_cov_5.278571_g5131_i0 PRJNA745553 5325 493 5.278571 26.02335503 Sandona 1239209 SAR_Eukaryotes SAR_Eukaryotes 905 0   NTclustered gi|219524777|gb|EU709140.1| 563752 g5131 i0 99.797 100.062880324544 493 1 100 0 1 493 1087 595 Cercozoa sp. G11 18S ribosomal RNA gene, partial sequence blastn 49331 905 1 Eukaryota Sar   Cercozoa         Cercozoa sp. G11
8851712 8851712 PRJNA745553_S_NODE_27067_length_239_cov_3.487952_g26872_i0 PRJNA745553 27067 239 3.487952 8.33620528 Imbricatea 1736114 SAR_Eukaryotes SAR_Eukaryotes 209 1.2e-49   NTclustered gi|238617605|gb|FJ973380.1| 45107 g26872 i0 96.124 49.4393305439331 129 4 54 1 89 217 1954 1827 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 11816 211 0.990521327014218 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
13478092 13478092 PRJNA745553_S_NODE_27071_length_239_cov_3.301205_g26876_i0 PRJNA745553 27071 239 3.301205 7.88987995 Neocercomonas sp. strain 10-3.4 321426 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|62184260|gb|AY884314.1| 321426 g26876 i0 90.476 0.297071129707113 42 4 18 0 70 111 154 113 Neocercomonas sp. strain 10-3.4 small subunit ribosomal RNA gene, partial sequence blastn 71 56.5 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Neocercomonas Neocercomonas sp. strain 10-3.4
16501574 16501574 PRJNA745553_S_NODE_12893_length_342_cov_4.643123_g12698_i0 PRJNA745553 12893 342 4.643123 15.87948066 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 573 5.579999999999999e-159   NTclustered gi|219524778|gb|EU709141.1| 175275 g12698 i0 98.457 94.6608187134503 324 5 95 0 19 342 1552 1229 Uncultured cercozoan isolate HetChi37 18S ribosomal RNA gene, partial sequence blastn 32374 577 0.993067590987868 Eukaryota Sar   Cercozoa         uncultured Cercozoa
19851262 19851262 PRJNA745553_S_NODE_23916_length_253_cov_0.855556_g23721_i0 PRJNA745553 23916 253 0.855556 2.16455668 Protaspis grandis 361427 SAR_Eukaryotes SAR_Eukaryotes 248 2.73e-61   NTclustered gi|290760486|gb|GQ144689.1| 361427 g23721 i0 88.725 43.8458498023715 204 22 80 1 1 203 2021 2224 Protaspis grandis large subunit ribosomal RNA gene, partial sequence blastn 11093 248 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Protaspis Protaspis grandis
21600767 21600767 PRJNA745553_S_NODE_10897_length_369_cov_4.111486_g10702_i0 PRJNA745553 10897 369 4.111486 15.17138334 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 137 9.41e-28   NTclustered gi|290760487|gb|GQ144690.1| 629762 g10702 i0 96.386 22.5230352303523 83 3 22 0 287 369 1495 1413 Cercozoa sp. CC-2009d large subunit ribosomal RNA gene, partial sequence blastn 8311 137 1 Eukaryota Sar   Cercozoa         Cercozoa sp. CC-2009d
27811094 27811094 PRJNA745553_S_NODE_5264_length_495_cov_7.502370_g5070_i0 PRJNA745553 5264 495 7.50237 37.1367315 Bigelowiella natans 227086 SAR_Eukaryotes SAR_Eukaryotes 106 1.54e-26   NR AAP34642.1 227086 g5070 i0 74.6 0.406060606060606 67 17 40.6 0 22 222 10 76 AAP34642.1 small ubiquitin-like modifier [Bigelowiella natans] diamond 201 106 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans
31126641 31126641 PRJNA745553_S_NODE_2655_length_608_cov_5.472897_g2476_i0 PRJNA745553 2655 608 5.472897 33.27521376 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 120 1.79e-30   NR MES1915609.1 1215613 g2476 i0 51.4 0.730263157894737 148 59 70.1 3 605 180 42 182 MES1915609.1 hypothetical protein [Cercozoa sp. M6MM] diamond 444 120 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
31411636 31411636 PRJNA745553_S_NODE_9436_length_394_cov_2.813084_g9241_i0 PRJNA745553 9436 394 2.813084 11.08355096 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 124 7.98e-34   NR ADK26622.1 323453 g9241 i0 98.3 0.449238578680203 59 1 44.9 0 2 178 72 130 ADK26622.1 rps22a [Heteromita sp. PRA-74] diamond 177 124 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;