RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA745553" and tax_kingdom = "Shotokuvirae"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Shotokuvirae · 4 ✖

bioproject 1

  • PRJNA745553 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5827890 5827890 PRJNA745553_S_NODE_25625_length_245_cov_6.255814_g25430_i0 PRJNA745553 25625 245 6.255814 15.3267443 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.022   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g25430 i0 100 0.114285714285714 28 0 11 0 1 28 3116 3089 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
8377779 8377779 PRJNA745553_S_NODE_6407_length_461_cov_7.108247_g6213_i0 PRJNA745553 6407 461 7.108247 32.76901867 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.045   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g6213 i0 100 0.0607375271149675 28 0 6 0 434 461 29 2 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
21126875 21126875 PRJNA745553_S_NODE_27957_length_233_cov_2.768750_g27762_i0 PRJNA745553 27957 233 2.76875 6.4511875 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.021   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g27762 i0 100 0.120171673819742 28 0 12 0 206 233 3089 3116 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
30084219 30084219 PRJNA745553_S_NODE_13312_length_337_cov_3.939394_g13117_i0 PRJNA745553 13312 337 3.939394 13.27575778 Betapolyomavirus macacae 1891767 Viruses Viruses 54.7 6.95e-6   NR AAK29054.1 1891767 g13117 i0 78.1 0.28486646884273 32 7 28.5 0 103 8 506 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 96 54.7 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;