RNAquarium Metadata Server
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contig_metadata

13 rows where bioproject = "PRJNA745553", tax_kingdom = "Orthornavirae" and tax_phylum = "Pisuviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 13 ✖

tax_kingdom 1

  • Orthornavirae · 13 ✖

bioproject 1

  • PRJNA745553 · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
724050 724050 PRJNA745553_S_NODE_14401_length_324_cov_6.163347_g14206_i0 PRJNA745553 14401 324 6.163347 19.96924428 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 56.5 0.002   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g14206 i0 100 0.354938271604938 30 0 9 0 1 30 56 85 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 115 56.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
5827920 5827920 PRJNA745553_S_NODE_27505_length_236_cov_3.055215_g27310_i0 PRJNA745553 27505 236 3.055215 7.2103074 Nepovirus cycas 3047785 Viruses Viruses 383 6.61e-102   NTclustered gi|92019086|dbj|AB237656.1| 173976 g27310 i0 96.154 52.7923728813559 234 9 99 0 1 234 2153 1920 Cycas necrotic stunt virus gene for coat protein, partial cds blastn 12459 383 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Nepovirus Nepovirus cycas
5827951 5827951 PRJNA745553_S_NODE_29725_length_214_cov_4.914894_g29530_i0 PRJNA745553 29725 214 4.914894 10.51787316 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 52.8 0.019   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g29530 i0 100 0.130841121495327 28 0 13 0 187 214 86 59 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 28 52.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
9652493 9652493 PRJNA745553_S_NODE_12888_length_342_cov_4.884758_g12693_i0 PRJNA745553 12888 342 4.884758 16.70587236 Skokie dicistro-like virus 2789443 Viruses Viruses 514 3.43e-141   NTclustered gi|2806502719|gb|PQ054859.1| 2789443 g12693 i0 100 1.76315789473684 278 0 81 0 18 295 5046 5323 MAG: Skokie dicistro-like virus isolate QJ5MS4721 genomic sequence blastn 603 514 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Skokie dicistro-like virus
10928144 10928144 PRJNA745553_S_NODE_19089_length_283_cov_1.690476_g18894_i0 PRJNA745553 19089 283 1.690476 4.78404708 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 52.8 0.026   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g18894 i0 100 0.0989399293286219 28 0 10 0 256 283 86 59 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 28 52.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
10928154 10928154 PRJNA745553_S_NODE_19849_length_277_cov_4.897059_g19654_i0 PRJNA745553 19849 277 4.897059 13.56485343 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 52.8 0.025   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g19654 i0 100 0.101083032490975 28 0 10 0 1 28 59 86 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 28 52.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
13478008 13478008 PRJNA745553_S_NODE_2191_length_639_cov_5.393993_g2017_i0 PRJNA745553 2191 639 5.393993 34.46761527 Logan nepovirus 3115782 Viruses Viruses 972 0   NTclustered gi|2752247874|tpg|BK065094.1| 3115782 g2017 i0 95.559 54.1799687010955 608 25 95 1 34 639 8213 7606 TPA_asm: Logan nepovirus segment RNA1 polyprotein gene, complete cds blastn 34621 972 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Nepovirus Logan nepovirus
14753161 14753161 PRJNA745553_S_NODE_2632_length_610_cov_2.648045_g2453_i0 PRJNA745553 2632 610 2.648045 16.1530745 Dill cryptic virus 1 1408895 Viruses Viruses 994 0   NTclustered gi|551701374|gb|KF484727.1| 1408895 g2453 i0 96.066 2 610 24 100 0 1 610 74 683 Dill cryptic virus 1 isolate IPP_hortorum segment 2, complete sequence blastn 1220 994 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Dill cryptic virus 1
16026633 16026633 PRJNA745553_S_NODE_11453_length_362_cov_1.307958_g11258_i0 PRJNA745553 11453 362 1.307958 4.73480796 Rabovirus dehomo 3432093 Viruses Viruses 492 1.71e-134   NTclustered gi|2047105450|ref|NC_055160.1| 2682606 g11258 i0 93.155 0.92817679558011 336 22 93 1 28 362 7110 6775 Rabovirus D1 isolate MPV/NYC/2014/M005/0074, partial genome blastn 336 492 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Rabovirus Rabovirus dehomo
18575779 18575779 PRJNA745553_S_NODE_15795_length_310_cov_3.489451_g15600_i0 PRJNA745553 15795 310 3.489451 10.8172981 Periplaneta americana dicistro-like virus 3032225 Viruses Viruses 202 2.7199999999999992e-47   NTclustered gi|2754804027|tpg|BK063169.1| 3032225 g15600 i0 98.276 0.374193548387097 116 1 37 1 2 116 4552 4667 TPA_asm: Periplaneta americana dicistro-like virus hypothetical protein gene, partial cds blastn 116 202 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Periplaneta americana dicistro-like virus
22401814 22401814 PRJNA745553_S_NODE_4458_length_523_cov_5.071111_g4268_i0 PRJNA745553 4458 523 5.071111 26.52191053 Polerovirus BWYV 3431732 Viruses Viruses 534 4.18e-147   NTclustered gi|666669709|dbj|AB903038.1| 12042 g4268 i0 85.465 22.7055449330784 516 72 98 3 1 513 1477 962 Beet western yellows virus genomic RNA, nearly complete genome, strain: BWYV-Ashoro blastn 11875 534 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Polerovirus Polerovirus BWYV
23677393 23677393 PRJNA745553_S_NODE_439_length_963_cov_4.449438_g360_i0 PRJNA745553 439 963 4.449438 42.84808794 Rabovirus dehomo 3432093 Viruses Viruses 889 0   NTclustered gi|2047105450|ref|NC_055160.1| 2682606 g360 i0 83.403 3.06126687435099 958 159 99 0 4 961 965 8 Rabovirus D1 isolate MPV/NYC/2014/M005/0074, partial genome blastn 2948 889 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Rabovirus Rabovirus dehomo
27369165 27369165 PRJNA745553_S_NODE_25023_length_248_cov_1.760000_g24828_i0 PRJNA745553 25023 248 1.76 4.3648 Sclerotinia sclerotiorum fusarivirus 2 2822941 Viruses Viruses 171 3.839999999999999e-47   NR QUE49153.1 2822941 g24828 i0 97.6 5.95161290322581 82 2 99.2 0 248 3 627 708 QUE49153.1 MAG: polyprotein [Sclerotinia sclerotiorum fusarivirus 2] diamond 1476 171 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Fusariviridae   Sclerotinia sclerotiorum fusarivirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;