RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA745553", tax_kingdom = "Orthornavirae" and tax_phylum = "Duplornaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 3 ✖

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA745553 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27495173 27495173 PRJNA745553_S_NODE_20183_length_275_cov_3.237624_g19988_i0 PRJNA745553 20183 275 3.237624 8.903466 Black raspberry virus F 463392 Viruses Viruses 130 1.0799999999999999e-32   NR YP_001497151.1 463392 g19988 i0 71.1 0.905454545454545 83 24 90.5 0 24 272 7 89 YP_001497151.1 RNA-dependent RNA polymerase [Black raspberry virus F] diamond 249 130 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Black raspberry virus F
27694827 27694827 PRJNA745553_S_NODE_12384_length_349_cov_1.394928_g12189_i0 PRJNA745553 12384 349 1.394928 4.86829872 Ghabrivirales 2732540 Viruses Viruses 81.3 3.98e-15   NR WAK77569.1 1955172 g12189 i0 38.9 1.92550143266476 113 64 94.6 2 16 345 123 233 WAK77569.1 MAG: capsid protein [Totiviridae sp.] diamond 672 81.3 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.
31284972 31284972 PRJNA745553_S_NODE_7175_length_442_cov_1.788618_g6981_i0 PRJNA745553 7175 442 1.788618 7.90569156 Alphachrysovirus aspergilli 607716 Viruses Viruses 163 2.09e-43   NR YP_009508106.1 607716 g6981 i0 55.9 1.94117647058824 143 61 97.1 1 442 14 521 661 YP_009508106.1 hypothetical protein [Alphachrysovirus aspergilli] diamond 858 163 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Chrysoviridae Alphachrysovirus Alphachrysovirus aspergilli

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;