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contig_metadata

31 rows where bioproject = "PRJNA745553", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 31 ✖

tax_kingdom 1

  • Bacillati · 31 ✖

bioproject 1

  • PRJNA745553 · 31 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2474121 2474121 PRJNA745553_S_NODE_7502_length_434_cov_1.972299_g7307_i0 PRJNA745553 7502 434 1.972299 8.55977766 Chthonomonas 1077265 Bacteria Bacteria 401 3.609999999999999e-107   NTclustered gi|526641997|ref|NR_103994.1| 454171 g7307 i0 87.679 162.65668202765 349 38 80 5 89 434 1556 1902 Chthonomonas calidirosea strain T49 23S ribosomal RNA gene, complete sequence blastn 70593 401 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae Chthonomonas Chthonomonas calidirosea
3275722 3275722 PRJNA745553_S_NODE_6183_length_467_cov_6.197970_g5989_i0 PRJNA745553 6183 467 6.19797 28.9445199 Armatimonadota bacterium 2033014 Bacteria Bacteria 211 8.900000000000001e-65   NR HTE16857.1 2033014 g5989 i0 70.2 0.905781584582441 141 42 90.6 0 6 428 43 183 HTE16857.1 Gfo/Idh/MocA family oxidoreductase [Armatimonadota bacterium] diamond 423 211 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
5026936 5026936 PRJNA745553_S_NODE_28824_length_227_cov_2.500000_g28629_i0 PRJNA745553 28824 227 2.5 5.675 Fimbriimonas 1005038 Bacteria Bacteria 254 5.16e-63   NTclustered gi|663071213|gb|CP007139.1| 661478 g28629 i0 88.942 55.5242290748899 208 20 91 3 11 217 29581 29786 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 12604 254 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
9652561 9652561 PRJNA745553_S_NODE_16848_length_301_cov_1.482456_g16653_i0 PRJNA745553 16848 301 1.482456 4.46219256 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 164 7.11e-47   NR MFN3729038.1 2682144 g16653 i0 86 3.98671096345515 100 14 99.7 0 1 300 151 250 MFN3729038.1 cell division protein FtsZ [Fimbriimonadaceae bacterium] diamond 1200 164 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
9652885 9652885 PRJNA745553_S_NODE_6968_length_447_cov_2488.850267_g6774_i0 PRJNA745553 6968 447 2488.850267 11125.16069349 Armatimonadota bacterium 2033014 Bacteria Bacteria 130 1.4999999999999999e-33   NR MBI5706619.1 2033014 g6774 i0 68 1.28859060402685 97 28 63.8 2 20 304 75 170 MBI5706619.1 redoxin family protein [Armatimonadota bacterium] diamond 576 130 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
10928083 10928083 PRJNA745553_S_NODE_15969_length_308_cov_16.455319_g15774_i0 PRJNA745553 15969 308 16.455319 50.68238252 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 274 5.64e-69   NTclustered gi|663071213|gb|CP007139.1| 661478 g15774 i0 86.992 0.798701298701299 246 28 79 4 24 267 1625878 1625635 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 246 274 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
10928266 10928266 PRJNA745553_S_NODE_27049_length_239_cov_4.253012_g26854_i0 PRJNA745553 27049 239 4.253012 10.16469868 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 224 4.3e-54   NTclustered gi|2076452338|gb|CP075364.1| 2682144 g26854 i0 88.421 97.928870292887 190 17 78 5 28 214 667597 667410 MAG: Fimbriimonadaceae bacterium isolate ACE_ARM1 chromosome blastn 23405 224 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
12203651 12203651 PRJNA745553_S_NODE_21310_length_268_cov_1.579487_g21115_i0 PRJNA745553 21310 268 1.579487 4.23302516 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 263 1.04e-65   NTclustered gi|2874253701|emb|OY969427.1| 157466 g21115 i0 84.791 219.369402985075 263 39 98 1 1 263 3407445 3407184 MAG: uncultured Armatimonadetes bacterium isolate MFD09671.bin.1.19 genome assembly, chromosome: 1 blastn 58791 263 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
12203899 12203899 PRJNA745553_S_NODE_6590_length_457_cov_1.786458_g6396_i0 PRJNA745553 6590 457 1.786458 8.16411306 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 218 9.4e-70   NR HRI43456.1 2682144 g6396 i0 62.5 2.95404814004376 152 56 99.1 1 4 456 27 178 HRI43456.1 cysteine dioxygenase family protein [Fimbriimonadaceae bacterium] diamond 1350 218 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
16501615 16501615 PRJNA745553_S_NODE_18013_length_291_cov_1.481651_g17818_i0 PRJNA745553 18013 291 1.481651 4.31160441 Fimbriimonas 1005038 Bacteria Bacteria 322 1.86e-83   NTclustered gi|663071213|gb|CP007139.1| 661478 g17818 i0 86.689 88.2199312714777 293 36 100 3 1 291 28942 29233 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 25672 322 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
23677070 23677070 PRJNA745553_S_NODE_1419_length_712_cov_20.586854_g556_i1 PRJNA745553 1419 712 20.586854 146.57840048 Fimbriimonas sp. 1936159 Bacteria Bacteria 832 0   NTclustered gi|2778022393|emb|OZ123194.1| 1936159 g556 i1 89.697 214.009831460674 660 57 92 9 58 711 1687573 1688227 MAG: Fimbriimonas sp. isolate MsE-30jul19-LR-01 genome assembly, chromosome: 1 blastn 152375 832 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
24950929 24950929 PRJNA745553_S_NODE_5940_length_474_cov_6.049875_g5746_i0 PRJNA745553 5940 474 6.049875 28.6764075 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 211 7.19e-50   NTclustered gi|2874254000|emb|OY970325.1| 157466 g5746 i0 83.478 66.746835443038 230 34 48 4 4 231 1305729 1305502 MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 blastn 31638 211 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
26704350 26704350 PRJNA745553_S_NODE_22541_length_260_cov_9.144385_g22346_i0 PRJNA745553 22541 260 9.144385 23.775401 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 71.2 5.09e-13   NR HRJ26589.1 2682144 g22346 i0 56 0.576923076923077 50 22 57.7 0 95 244 4 53 HRJ26589.1 DUF2752 domain-containing protein [Fimbriimonadaceae bacterium] diamond 150 71.2 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
27115729 27115729 PRJNA745553_S_NODE_24982_length_248_cov_2.662857_g24787_i0 PRJNA745553 24982 248 2.662857 6.60388536 Fimbriimonas sp. 1936159 Bacteria Bacteria 84.3 8.03e-17   NR HLO97187.1 1936159 g24787 i0 50 0.943548387096774 78 39 94.4 0 245 12 183 260 HLO97187.1 hypothetical protein [Fimbriimonas sp.] diamond 234 84.3 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
27947170 27947170 PRJNA745553_S_NODE_21245_length_268_cov_3.487179_g21050_i0 PRJNA745553 21245 268 3.487179 9.34563972 Bacteria 2 Bacteria Bacteria 70.5 4.11e-13   NR OWU65140.1 1987502 g21050 i0 52.6 3.40298507462687 76 34 84 2 35 259 4 78 OWU65140.1 MAG: hypothetical protein CBB60_006225 [Armatimonadetes bacterium Cent15-Ar3] diamond 912 70.9 0.994358251057828 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium Cent15-Ar3
27968720 27968720 PRJNA745553_S_NODE_8605_length_410_cov_4.000000_g8410_i0 PRJNA745553 8605 410 4 16.4 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 104 4.8499999999999996e-23   NR WP_158409332.1 1005039 g8410 i0 40.9 0.965853658536585 132 78 96.6 0 12 407 547 678 WP_158409332.1 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB [Fimbriimonas ginsengisoli] diamond 396 104 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
28284284 28284284 PRJNA745553_S_NODE_28826_length_227_cov_2.500000_g28631_i0 PRJNA745553 28826 227 2.5 5.675 Armatimonadota bacterium 2033014 Bacteria Bacteria 73.6 8.75e-15   NR MCA0359469.1 2033014 g28631 i0 56.3 1.61233480176211 64 28 84.6 0 218 27 1 64 MCA0359469.1 ribonuclease P protein component [Armatimonadota bacterium] diamond 366 73.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29294832 29294832 PRJNA745553_S_NODE_28009_length_232_cov_10.352201_g27814_i0 PRJNA745553 28009 232 10.352201 24.01710632 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 60.8 9.83e-10   NR WP_025229179.1 1005039 g27814 i0 92.9 0.724137931034483 28 2 36.2 0 111 28 1 28 WP_025229179.1 50S ribosomal protein L19 [Fimbriimonas ginsengisoli] diamond 168 60.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
29620094 29620094 PRJNA745553_S_NODE_15050_length_317_cov_6.864754_g14855_i0 PRJNA745553 15050 317 6.864754 21.76127018 Bacteria 2 Bacteria Bacteria 72.4 8.34e-13   NR MBN9503019.1 2033014 g14855 i0 44.7 1.66561514195584 85 42 79.5 2 276 25 7 87 MBN9503019.1 C40 family peptidase [Armatimonadota bacterium] diamond 528 72.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29778325 29778325 PRJNA745553_S_NODE_16591_length_303_cov_2.678261_g16396_i0 PRJNA745553 16591 303 2.678261 8.11513083 Bacteria 2 Bacteria Bacteria 94.7 3.11e-20   NR MEQ1823028.1 2682144 g16396 i0 58.8 3.97029702970297 80 33 79.2 0 25 264 22 101 MEQ1823028.1 RNA polymerase factor sigma-54 [Fimbriimonadaceae bacterium] diamond 1203 94.7 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
29863147 29863147 PRJNA745553_S_NODE_18471_length_287_cov_3.546729_g18276_i0 PRJNA745553 18471 287 3.546729 10.17911223 Armatimonadetes bacterium CG_4_1 2033014 Bacteria Bacteria 53.1 1.35e-5   NR PIY44557.1 1973909 g18276 i0 100 0.250871080139373 24 0 25.1 0 169 240 357 380 PIY44557.1 MAG: hypothetical protein COZ05_07900 [Armatimonadetes bacterium CG_4_10_14_3_um_filter_59_10] diamond 72 53.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium CG_4_10_14_3_um_filter_59_10
29957927 29957927 PRJNA745553_S_NODE_23771_length_253_cov_4.905556_g23576_i0 PRJNA745553 23771 253 4.905556 12.41105668 Fimbriimonas sp. 1936159 Bacteria Bacteria 105 4.92e-25   NR MDR3689450.1 1936159 g23576 i0 65 1.94466403162055 80 25 91.3 1 21 251 226 305 MDR3689450.1 signal peptidase I [Fimbriimonas sp.] diamond 492 105 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
30021314 30021314 PRJNA745553_S_NODE_11251_length_365_cov_1.054795_g11056_i0 PRJNA745553 11251 365 1.054795 3.85000175 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 136 5.939999999999998e-35   NR MEQ1933031.1 2682144 g11056 i0 65.7 2.60547945205479 105 36 86.3 0 40 354 171 275 MEQ1933031.1 TROVE domain-containing protein [Fimbriimonadaceae bacterium] diamond 951 136 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
30147268 30147268 PRJNA745553_S_NODE_27592_length_235_cov_5.185185_g27397_i0 PRJNA745553 27592 235 5.185185 12.18518475 Fimbriimonas sp. 1936159 Bacteria Bacteria 64.7 5.74e-10   NR HWD38259.1 1936159 g27397 i0 57.1 2.05531914893617 56 24 71.5 0 219 52 326 381 HWD38259.1 S41 family peptidase [Fimbriimonas sp.] diamond 483 64.7 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
30274207 30274207 PRJNA745553_S_NODE_18352_length_288_cov_4.297674_g18157_i0 PRJNA745553 18352 288 4.297674 12.37730112 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 63.9 4.71e-10   NR HRI42899.1 2682144 g18157 i0 73.8 0.4375 42 11 43.8 0 146 21 26 67 HRI42899.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 126 63.9 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
30284302 30284302 PRJNA745553_S_NODE_14452_length_324_cov_1.840637_g14257_i0 PRJNA745553 14452 324 1.840637 5.96366388 Fimbriimonas 1005038 Bacteria Bacteria 131 3.94e-34   NR WP_025227112.1 1005039 g14257 i0 73 5.08333333333333 89 24 82.4 0 315 49 248 336 WP_025227112.1 cell division protein FtsZ [Fimbriimonas ginsengisoli] diamond 1647 132 0.992424242424242 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
30599699 30599699 PRJNA745553_S_NODE_5673_length_482_cov_6.726161_g5479_i0 PRJNA745553 5673 482 6.726161 32.42009602 Bacteria 2 Bacteria Bacteria 68.2 6.54e-10   NR OJU62695.1 1895717 g5479 i0 38.1 1.84854771784232 97 59 59.8 1 156 443 198 294 OJU62695.1 MAG: hypothetical protein BGO01_09790 [Armatimonadetes bacterium 55-13] diamond 891 68.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium 55-13
31790965 31790965 PRJNA745553_S_NODE_26837_length_241_cov_0.916667_g26642_i0 PRJNA745553 26837 241 0.916667 2.20916747 Fimbriimonas sp. 1936159 Bacteria Bacteria 47.8 5.97e-4   NR MEZ0326870.1 1936159 g26642 i0 53.1 1.33195020746888 49 20 59.8 2 206 63 165 211 MEZ0326870.1 type II secretion system protein GspD [Fimbriimonas sp.] diamond 321 47.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
31917670 31917670 PRJNA745553_S_NODE_14017_length_329_cov_0.871094_g13822_i0 PRJNA745553 14017 329 0.871094 2.86589926 Capsulimonas corticalis 2219043 Bacteria Bacteria 66.2 4.22e-10   NR WP_301002221.1 2219043 g13822 i0 49.3 1.83282674772036 75 27 59.3 3 324 130 96 169 WP_301002221.1 DUF1559 domain-containing protein [Capsulimonas corticalis] diamond 603 66.2 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas corticalis
32202487 32202487 PRJNA745553_S_NODE_3598_length_559_cov_5.102881_g3413_i0 PRJNA745553 3598 559 5.102881 28.52510479 Fimbriimonas sp. 1936159 Bacteria Bacteria 219 2.38e-68   NR HSI73991.1 1936159 g3413 i0 64.3 1.7871198568873 171 61 91.8 0 37 549 28 198 HSI73991.1 HAD family hydrolase [Fimbriimonas sp.] diamond 999 219 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
32266004 32266004 PRJNA745553_S_NODE_17958_length_291_cov_3.591743_g17763_i0 PRJNA745553 17958 291 3.591743 10.45197213 Fimbriimonas sp. 1936159 Bacteria Bacteria 129 6.5e-34   NR MDR3690382.1 1936159 g17763 i0 70.3 0.938144329896907 91 26 92.8 1 22 291 187 277 MDR3690382.1 polysaccharide pyruvyl transferase CsaB [Fimbriimonas sp.] diamond 273 129 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;