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contig_metadata

17 rows where bioproject = "PRJNA745553", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 17 ✖

tax_clade 1

  • Sar · 17 ✖

bioproject 1

  • PRJNA745553 · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
724451 724451 PRJNA745553_S_NODE_9201_length_398_cov_6.375385_g9006_i0 PRJNA745553 9201 398 6.375385 25.3740323 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.038   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g9006 i0 100 0.070351758793969807 28 0 7 0 1 28 11 38 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 28 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
2000457 2000457 PRJNA745553_S_NODE_5482_length_488_cov_7.771084_g5288_i0 PRJNA745553 5482 488 7.771084 37.92288992 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.048   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g5288 i0 100 0.0573770491803279 28 0 6 0 1 28 12 39 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 28 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
3750292 3750292 PRJNA745553_S_NODE_10283_length_378_cov_4.009836_g10088_i0 PRJNA745553 10283 378 4.009836 15.15718008 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 296 1.51e-75   NTclustered gi|406718351|emb|HE819877.1| 109352 g10088 i0 89.831 55.2830687830688 236 16 61 7 3 233 2613 2381 Paramecium duboscqui genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, strain Ppd-3 blastn 20897 296 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium duboscqui
4552667 4552667 PRJNA745553_S_NODE_18764_length_285_cov_2.688679_g18569_i0 PRJNA745553 18764 285 2.688679 7.66273515 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.026   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g18569 i0 100 0.0982456140350877 28 0 10 0 1 28 12 39 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 28 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
5827858 5827858 PRJNA745553_S_NODE_23845_length_253_cov_2.138889_g23650_i0 PRJNA745553 23845 253 2.138889 5.41138917 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.023   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g23650 i0 100 0.110671936758893 28 0 11 0 1 28 11 38 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 28 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
5827919 5827919 PRJNA745553_S_NODE_27485_length_236_cov_3.693252_g27290_i0 PRJNA745553 27485 236 3.693252 8.71607472 Opercularia sp. ZhW-2019a 2582953 SAR_Eukaryotes SAR_Eukaryotes 436 4.999999999999999e-118   NTclustered gi|2304601486|gb|OP458307.1| 2582953 g27290 i0 100 95.5296610169491 236 0 100 0 1 236 337 102 Opercularia sp. ZhW-2019a large subunit ribosomal RNA gene, partial sequence blastn 22545 436 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Operculariidae Opercularia Opercularia sp. ZhW-2019a
6302779 6302779 PRJNA745553_S_NODE_9345_length_395_cov_9.413043_g9150_i0 PRJNA745553 9345 395 9.413043 37.18151985 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 582 1.08e-161   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g9150 i0 96.328 32.6151898734177 354 13 90 0 18 371 354 1 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 12883 582 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
7102995 7102995 PRJNA745553_S_NODE_28126_length_232_cov_2.308176_g27931_i0 PRJNA745553 28126 232 2.308176 5.35496832 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.021   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g27931 i0 100 0.120689655172414 28 0 12 0 205 232 38 11 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 28 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
9652942 9652942 PRJNA745553_S_NODE_9628_length_390_cov_5.331230_g9433_i0 PRJNA745553 9628 390 5.33123 20.791797 Remanella sp. 1 BS-2022 2930476 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.01   NTclustered gi|2261269021|emb|OX095846.1| 2930476 g9433 i0 100 0.0743589743589744 29 0 7 0 1 29 14 42 Remanella sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863273, clone N44:18S_rRNA::TRINITY_DN644_c0_g1_i12:99-1693(+) blastn 29 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Remanella Remanella sp. 1 BS-2022
10928035 10928035 PRJNA745553_S_NODE_13229_length_338_cov_6.588679_g13034_i0 PRJNA745553 13229 338 6.588679 22.26973502 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.009   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g13034 i0 100 0.440828402366864 29 0 9 0 1 29 10 38 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 149 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
10928309 10928309 PRJNA745553_S_NODE_29609_length_216_cov_4.307692_g29414_i0 PRJNA745553 29609 216 4.307692 9.30461472 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.005   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g29414 i0 100 0.652777777777778 29 0 13 0 188 216 38 10 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 141 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
13478219 13478219 PRJNA745553_S_NODE_5171_length_498_cov_7.691765_g4977_i0 PRJNA745553 5171 498 7.691765 38.3049897 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 737 0   NTclustered gi|512134943|gb|JX178902.1| 1295638 g4977 i0 97.669 83.0562248995984 429 10 86 0 23 451 988 1416 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 41362 737 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
22401681 22401681 PRJNA745553_S_NODE_24458_length_250_cov_3.259887_g24263_i0 PRJNA745553 24458 250 3.259887 8.1497175 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g24263 i0 94.444 0.144 36 1 14 1 1 36 13 47 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 36 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
27369162 27369162 PRJNA745553_S_NODE_2203_length_638_cov_2.233628_g2029_i0 PRJNA745553 2203 638 2.233628 14.25054664 Paramecium octaurelia 43137 SAR_Eukaryotes SAR_Eukaryotes 146 1.24e-36   NR CAD8187874.1 43137 g2029 i0 42.4 2.83542319749216 198 108 92.2 3 628 41 458 651 CAD8187874.1 unnamed protein product [Paramecium octaurelia] diamond 1809 146 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium octaurelia
29904887 29904887 PRJNA745553_S_NODE_28571_length_229_cov_2.089744_g28376_i0 PRJNA745553 28571 229 2.089744 4.78551376 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 122 1.3e-33   NR CDW72918.1 5949 g28376 i0 71.1 14.9082969432314 76 22 99.6 0 228 1 18 93 CDW72918.1 protein mago nashi [Stylonychia lemnae] diamond 3414 123 0.991869918699187 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
29957921 29957921 PRJNA745553_S_NODE_11411_length_362_cov_8.238754_g11216_i0 PRJNA745553 11411 362 8.238754 29.82428948 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 55.5 1.39e-6   NR CDW86774.1 5949 g11216 i0 28.6 0.812154696132597 98 69 80.4 1 3 293 73 170 CDW86774.1 UNKNOWN [Stylonychia lemnae] diamond 294 55.5 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
30495210 30495210 PRJNA745553_S_NODE_17513_length_295_cov_1.765766_g17318_i0 PRJNA745553 17513 295 1.765766 5.2090097 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 83.2 2.45e-16   NR CAG9319529.1 1481888 g17318 i0 65.4 1.05762711864407 52 18 52.9 0 293 138 307 358 CAG9319529.1 unnamed protein product [Blepharisma stoltei] diamond 312 83.2 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;