RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA745553", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA745553 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7102868 7102868 PRJNA745553_S_NODE_19646_length_279_cov_2.383495_g19451_i0 PRJNA745553 19646 279 2.383495 6.64995105 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 196 1.12e-45   NTclustered gi|1673120211|ref|XM_029366135.1| 94643 g19451 i0 80.15 5.51254480286738 267 49 95 4 1 265 530 794 Besnoitia besnoiti guanine nucleotide-binding protein (BESB_077740), partial mRNA blastn 1538 196 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
12203814 12203814 PRJNA745553_S_NODE_30310_length_204_cov_4.114504_g30115_i0 PRJNA745553 30310 204 4.114504 8.39358816 Gregarina sp. Phaedon/Daegwallyeong/2010 1049247 SAR_Eukaryotes SAR_Eukaryotes 207 3.59e-49   NTclustered gi|339715944|gb|JF412715.1| 1049247 g30115 i0 86.702 88.5343137254902 188 24 92 1 18 204 4841 4654 Gregarina sp. Phaedon/Daegwallyeong/2010 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence; and 28S-18S intergenic spacer, partial sequence blastn 18061 207 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina sp. Phaedon/Daegwallyeong/2010
12203910 12203910 PRJNA745553_S_NODE_7090_length_444_cov_14.110512_g6896_i0 PRJNA745553 7090 444 14.110512 62.65067328 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 88.2 6.72e-20   NR XP_016654546.1 31271 g6896 i0 71.2 4.37837837837838 59 17 39.9 0 106 282 1 59 XP_016654546.1 60S ribosomal protein L29, putative [Plasmodium chabaudi chabaudi] diamond 1944 88.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
13478210 13478210 PRJNA745553_S_NODE_4871_length_508_cov_4.464368_g4679_i0 PRJNA745553 4871 508 4.464368 22.67898944 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.014   NTclustered gi|916505273|ref|XM_013497763.1| 44415 g4679 i0 100 0.114173228346457 29 0 6 0 420 448 540 568 Eimeria mitis uncharacterized protein (EMH_0060170), partial mRNA blastn 58 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
14753325 14753325 PRJNA745553_S_NODE_6692_length_454_cov_3.640420_g6498_i0 PRJNA745553 6692 454 3.64042 16.5275068 Plasmodium chabaudi 5825 SAR_Eukaryotes SAR_Eukaryotes 63.9 2.03e-5   NTclustered gi|1027955884|ref|XM_016798434.1| 31271 g6498 i0 95 0.319383259911894 40 2 9 0 383 422 842 803 Plasmodium chabaudi chabaudi conserved Plasmodium protein, unknown function (PCHAS_1031800), partial mRNA blastn 145 63.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
19851268 19851268 PRJNA745553_S_NODE_24256_length_251_cov_2.157303_g24061_i0 PRJNA745553 24256 251 2.157303 5.41483053 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 63.9 1.05e-5   NTclustered gi|921120485|ref|XM_013579407.1| 51315 g24061 i0 91.489 18.9840637450199 47 2 18 2 8 53 2160 2205 Eimeria necatrix hypothetical protein, conserved partial mRNA blastn 4765 63.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
23677083 23677083 PRJNA745553_S_NODE_15199_length_316_cov_2.185185_g15004_i0 PRJNA745553 15199 316 2.185185 6.9051846 Corallicola aquarius 2294178 SAR_Eukaryotes SAR_Eukaryotes 385 2.57e-102   NTclustered gi|1446202030|gb|MH304761.1| 2294178 g15004 i0 88.608 102.354430379747 316 36 100 0 1 316 3331 3646 Corallicola aquarius isolate wkC1 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 32344 385 1 Eukaryota Sar   Apicomplexa Conoidasida Corallicolida Corallicolidae Corallicola Corallicola aquarius
31073841 31073841 PRJNA745553_S_NODE_25475_length_246_cov_2.271676_g25280_i0 PRJNA745553 25475 246 2.271676 5.58832296 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 62 5.37e-9   NR KAI4839932.1 5824 g25280 i0 68.4 0.926829268292683 38 12 46.3 0 245 132 26 63 KAI4839932.1 hypothetical protein MKS88_001284 [Plasmodium brasilianum] diamond 228 62 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium brasilianum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;