RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA745553", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 4 ✖

tax_phylum 1

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA745553 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24150349 24150349 PRJNA745553_S_NODE_5319_length_493_cov_6.592857_g5125_i0 PRJNA745553 5319 493 6.592857 32.50278501 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 149 1.2499999999999997e-42   NR KAJ3424417.1 1746091 g5125 i0 52.8 0.864097363083164 142 66 86.4 1 2 427 30 170 KAJ3424417.1 60S ribosomal protein L18A [Anaeramoeba flamelloides] diamond 426 149 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
27400533 27400533 PRJNA745553_S_NODE_1423_length_712_cov_5.140845_g1287_i0 PRJNA745553 1423 712 5.140845 36.6028164 Kipferlia bialata 797122 Fornicata other_Eukaryota 147 4.799999999999999e-38   NR GIQ82408.1 797122 g1287 i0 38.2 2.9873595505618 220 128 89.3 3 5 640 184 403 GIQ82408.1 hypothetical protein KIPB_003539 [Kipferlia bialata] diamond 2127 147 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
32676325 32676325 PRJNA745553_S_NODE_11500_length_361_cov_1.871528_g11305_i0 PRJNA745553 11500 361 1.871528 6.75621608 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 53.1 3.24e-5   NR KAJ3435542.1 1746091 g11305 i0 36.1 0.598337950138504 72 46 59.8 0 332 117 1169 1240 KAJ3435542.1 faciogenital dysplasia protein [Anaeramoeba flamelloides] diamond 216 53.1 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
32802379 32802379 PRJNA745553_S_NODE_8540_length_411_cov_8.366864_g8345_i0 PRJNA745553 8540 411 8.366864 34.38781104 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 61.6 5.92e-8   NR KAJ5073099.1 1746090 g8345 i0 36.5 0.839416058394161 115 70 83.9 1 3 347 116 227 KAJ5073099.1 alpha-actinin sarcomeric-like protein [Anaeramoeba ignava] diamond 345 61.6 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;