RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA745553", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA745553 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
723991 723991 PRJNA745553_S_NODE_11121_length_366_cov_6.129693_g10926_i0 PRJNA745553 11121 366 6.129693 22.43467638 Ignavibacteria bacterium 2053306 Bacteria Bacteria 129 1.7199999999999999e-34   NR MBD1210910.1 2053306 g10926 i0 100 0.557377049180328 68 0 55.7 0 334 131 185 252 MBD1210910.1 ParA family protein [Ignavibacteria bacterium] diamond 204 129 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
29368048 29368048 PRJNA745553_S_NODE_5109_length_500_cov_18.023419_g4915_i0 PRJNA745553 5109 500 18.023419 90.117095 Bacteria 2 Bacteria Bacteria 88.2 5.35e-18   NR OQA65801.1 1852898 g4915 i0 57.4 2.01 68 28 40.8 1 468 265 157 223 OQA65801.1 MAG: HAD superfamily, subfamily IIIB (Acid phosphatase) [Ignavibacteria bacterium ADurb.Bin266] diamond 1005 88.6 0.99548532731377 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteria bacterium ADurb.Bin266

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;