RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA745553", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA745553 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14753246 14753246 PRJNA745553_S_NODE_3392_length_568_cov_6.800000_g3208_i0 PRJNA745553 3392 568 6.8 38.624 uncultured Methylomirabilota bacterium 991135 Bacteria Bacteria 809 0   NTclustered gi|2874253892|emb|OY970067.1| 991135 g3208 i0 93.273 103.431338028169 550 36 97 1 1 549 4746610 4747159 MAG: uncultured candidate division NC10 bacterium isolate MFD01231.bin.c.1 genome assembly, chromosome: 1 blastn 58749 809 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         uncultured Methylomirabilota bacterium
30337561 30337561 PRJNA745553_S_NODE_17812_length_292_cov_5.689498_g17617_i0 PRJNA745553 17812 292 5.689498 16.61333416 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 71.2 3.54e-13   NR HEY3064851.1 2072417 g17617 i0 56.9 1.3458904109589 65 27 66.8 1 10 204 82 145 HEY3064851.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 393 71.2 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;