RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA745553", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Glassiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Glassiibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA745553 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30147258 30147258 PRJNA745553_S_NODE_17432_length_295_cov_7.927928_g17237_i0 PRJNA745553 17432 295 7.927928 23.3873876 Candidatus Glassbacteria bacterium 2602803 Bacteria Bacteria 87.8 6.1e-18   NR MBN2288956.1 2602803 g17237 i0 48.7 2.33898305084746 76 39 77.3 0 24 251 280 355 MBN2288956.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Candidatus Glassbacteria bacterium] diamond 690 87.8 1 Bacteria Bacteria candidate phyla   Candidatus Glassiibacteriota         Candidatus Glassbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;