RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA745553", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_clade 1

  • Apusozoa · 3 ✖

bioproject 1

  • PRJNA745553 · 3 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9652465 9652465 PRJNA745553_S_NODE_10968_length_368_cov_6.844068_g10773_i0 PRJNA745553 10968 368 6.844068 25.18617024 Thecamonas trahens 529818 Root_unresolved Root_unresolved 178 5.53e-40   NTclustered gi|923125928|ref|XM_013900978.1| 461836 g10773 i0 87.179 1.36684782608696 156 20 42 0 96 251 200 45 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_11981), partial mRNA blastn 503 178 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
10928014 10928014 PRJNA745553_S_NODE_1229_length_734_cov_7.000000_g1105_i0 PRJNA745553 1229 734 7 51.38 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 186 9.479999999999999e-54   NR XP_013760592.1 461836 g1105 i0 64.3 0.584468664850136 143 49 58.4 1 734 306 196 336 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 429 186 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28410896 28410896 PRJNA745553_S_NODE_5646_length_483_cov_3.019512_g5452_i0 PRJNA745553 5646 483 3.019512 14.58424296 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 107 9.67e-26   NR XP_013755866.1 461836 g5452 i0 50.4 0.850931677018634 137 67 84.5 1 482 75 46 182 XP_013755866.1 calcium-binding protein NCS-1 [Thecamonas trahens ATCC 50062] diamond 411 107 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;