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contig_metadata

30 rows where bioproject = "PRJNA745553", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 30 ✖

tax_clade 1

  • Amoebozoa · 30 ✖

bioproject 1

  • PRJNA745553 · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1198639 1198639 PRJNA745553_S_NODE_26121_length_243_cov_4.835294_g25926_i0 PRJNA745553 26121 243 4.835294 11.74976442 root 1 Root_unresolved Root_unresolved 431 2.4099999999999995e-116   NTclustered gi|909719646|gb|KT185626.1| 5755 g25926 i0 99.578 41.0617283950617 237 0 97 1 8 243 3666 3902 Acanthamoeba castellanii 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 9978 431 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
2000187 2000187 PRJNA745553_S_NODE_18782_length_285_cov_2.179245_g18587_i0 PRJNA745553 18782 285 2.179245 6.21084825 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 315 3.039999999999999e-81   NTclustered gi|470439346|ref|XM_004339129.1| 1257118 g18587 i0 95 0.701754385964912 200 10 70 0 64 263 858 659 Acanthamoeba castellanii str. Neff methyltransferase domain containing protein (ACA1_058200), partial mRNA blastn 200 315 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
2000260 2000260 PRJNA745553_S_NODE_22962_length_258_cov_2.243243_g22767_i0 PRJNA745553 22962 258 2.243243 5.78756694 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 298 2.73e-76   NTclustered gi|300078498|gb|GU001160.1| 5755 g22767 i0 92.237 0.848837209302326 219 4 80 4 31 237 5927 5710 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 219 298 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
3275368 3275368 PRJNA745553_S_NODE_123_length_1394_cov_22.247540_g100_i0 PRJNA745553 123 1394 22.24754 310.1307076 Paramoeba aparasomata 2583407 Discosea other_Eukaryota 95.3 2.34e-14   NTclustered gi|1767098935|gb|MK518072.1| 2583407 g100 i0 87.805 12.6929698708752 82 8 6 1 766 845 14238 14319 Paramoeba aparasomata mitochondrion, complete genome blastn 17694 95.3 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba aparasomata
9652628 9652628 PRJNA745553_S_NODE_20668_length_272_cov_2.271357_g20473_i0 PRJNA745553 20668 272 2.271357 6.17809104 Korotnevella stella 218663 Discosea other_Eukaryota 440 4.559999999999998e-119   NTclustered gi|56548964|gb|AY686573.1| 218663 g20473 i0 98.039 87.3051470588235 255 1 92 2 1 251 1107 853 Korotnevella stella small subunit ribosomal RNA gene, partial sequence blastn 23747 440 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Korotnevella Korotnevella stella
9652648 9652648 PRJNA745553_S_NODE_21828_length_265_cov_1.203125_g21633_i0 PRJNA745553 21828 265 1.203125 3.18828125 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 119 1.64e-30   NR XP_004338439.1 1257118 g21633 i0 72.4 2.54716981132075 76 20 84.9 1 264 40 229 304 XP_004338439.1 protein phosphatase 6, catalytic subunit isoform a, putative [Acanthamoeba castellanii str. Neff] diamond 675 119 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14753024 14753024 PRJNA745553_S_NODE_17712_length_293_cov_3.854545_g17517_i0 PRJNA745553 17712 293 3.854545 11.29381685 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 403 6.51e-108   NTclustered gi|399764262|gb|JQ271773.1| 1105345 g17517 i0 92.908 35.122866894198 282 13 95 6 1 277 925 646 Vexillifera bacillipedes strain P20Z 18S ribosomal RNA gene, partial sequence blastn 10291 403 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
14753089 14753089 PRJNA745553_S_NODE_21652_length_266_cov_1.590674_g21457_i0 PRJNA745553 21652 266 1.590674 4.23119284 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 196 1.06e-45   NTclustered gi|470449263|ref|XM_004340206.1| 1257118 g21457 i0 92.701 0.759398496240602 137 9 51 1 14 149 1049 1185 Acanthamoeba castellanii str. Neff Omethyltransferase domain containing protein (ACA1_369770), partial mRNA blastn 202 196 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17302104 17302104 PRJNA745553_S_NODE_11834_length_356_cov_5.045936_g11639_i0 PRJNA745553 11834 356 5.045936 17.96353216 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 348 3.84e-91   NTclustered gi|300078498|gb|GU001160.1| 5755 g11639 i0 93.59 14.2837078651685 234 13 79 2 1 232 6092 6325 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 5085 348 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17302229 17302229 PRJNA745553_S_NODE_18054_length_290_cov_7.400922_g17859_i0 PRJNA745553 18054 290 7.4009219999999996 21.4626738 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 444 3.79e-120   NTclustered gi|300078498|gb|GU001160.1| 5755 g17859 i0 95.374 26.3551724137931 281 10 97 3 1 280 6745 7023 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7643 444 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17302230 17302230 PRJNA745553_S_NODE_18074_length_290_cov_4.617512_g17879_i0 PRJNA745553 18074 290 4.617512 13.3907848 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 473 4.8399999999999986e-129   NTclustered gi|470457259|ref|XM_004341073.1| 1257118 g17879 i0 97.473 0.955172413793103 277 7 96 0 5 281 2335 2059 Acanthamoeba castellanii str. Neff DNA-directed DNA polymerase (ACA1_236150), partial mRNA blastn 277 473 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21126786 21126786 PRJNA745553_S_NODE_2197_length_639_cov_3.068905_g2023_i0 PRJNA745553 2197 639 3.068905 19.61030295 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 676 0   NTclustered gi|470387059|ref|XM_004334206.1| 1257118 g2023 i0 95.139 0.676056338028169 432 15 67 1 126 551 438 7 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_026980), partial mRNA blastn 432 676 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22401583 22401583 PRJNA745553_S_NODE_18458_length_287_cov_4.228972_g18263_i0 PRJNA745553 18458 287 4.228972 12.13714964 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 254 6.78e-63   NTclustered gi|470520632|ref|XM_004353570.1| 1257118 g18263 i0 89.163 0.707317073170732 203 22 71 0 73 275 482 280 Acanthamoeba castellanii str. Neff putative peptidoglycan binding domain containing protein (ACA1_152930), partial mRNA blastn 203 254 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23677253 23677253 PRJNA745553_S_NODE_24399_length_250_cov_7.271186_g24204_i0 PRJNA745553 24399 250 7.271186 18.177965 Vannella sp. strain CAZ6/I 325077 Discosea other_Eukaryota 396 9.079999999999996e-106   NTclustered gi|62865939|gb|AY929914.1| 325077 g24204 i0 98.238 91.56 227 3 90 1 25 250 1403 1629 Vannella sp. strain CAZ6/I 18S small subunit ribosomal RNA gene, partial sequence blastn 22890 396 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain CAZ6/I
24150258 24150258 PRJNA745553_S_NODE_16979_length_299_cov_20.061947_g16784_i0 PRJNA745553 16979 299 20.061947 59.98522153 Comandonia 158895 Discosea other_Eukaryota 420 6.62e-113   NTclustered gi|18031725|gb|AY033896.1| 158896 g16784 i0 97.561 73.6989966555184 246 4 82 2 36 279 946 701 Comandonia operculata small subunit ribosomal RNA gene, complete sequence blastn 22036 424 0.990566037735849 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Comandonia Comandonia operculata
24950551 24950551 PRJNA745553_S_NODE_12240_length_350_cov_27.754513_g12045_i0 PRJNA745553 12240 350 27.754513 97.1407955 Acanthamoeba sp. KA/MSG1 215563 Discosea other_Eukaryota 479 1.2799999999999996e-130   NTclustered gi|27085434|gb|AY173002.1| 215563 g12045 i0 99.245 75.7485714285714 265 2 76 0 1 265 700 964 Acanthamoeba sp. KA/MSG1 18S ribosomal RNA gene, complete sequence blastn 26512 479 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp. KA/MSG1
24950992 24950992 PRJNA745553_S_NODE_8880_length_404_cov_14.734139_g8685_i0 PRJNA745553 8880 404 14.734139 59.52592156 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 510 5.32e-140   NTclustered gi|300078498|gb|GU001160.1| 5755 g8685 i0 89.524 30.7227722772277 420 21 100 16 1 404 6482 6070 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12412 510 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26926186 26926186 PRJNA745553_S_NODE_11342_length_363_cov_6.672414_g11147_i0 PRJNA745553 11342 363 6.672414 24.22086282 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 73.9 1.47e-12   NR XP_004340296.1 1257118 g11147 i0 62.7 0.421487603305785 51 19 42.1 0 113 265 366 416 XP_004340296.1 uncharacterized protein ACA1_370300 [Acanthamoeba castellanii str. Neff] diamond 153 73.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27178978 27178978 PRJNA745553_S_NODE_29382_length_220_cov_4.340136_g29187_i0 PRJNA745553 29382 220 4.340136 9.5482992 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 82.4 1.84e-16   NR XP_004334943.1 1257118 g29187 i0 61 4.11818181818182 59 23 80.5 0 26 202 303 361 XP_004334943.1 uncharacterized protein ACA1_095900 [Acanthamoeba castellanii str. Neff] diamond 906 82.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27274029 27274029 PRJNA745553_S_NODE_203_length_1216_cov_5.200350_g160_i0 PRJNA745553 203 1216 5.20035 63.236256 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 119 5.08e-25   NR XP_004342205.1 1257118 g160 i0 39.1 0.384868421052632 156 70 38.5 3 1133 666 669 799 XP_004342205.1 SAM domain (Sterile alpha motif) domain containing protein [Acanthamoeba castellanii str. Neff] diamond 468 119 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27747941 27747941 PRJNA745553_S_NODE_23144_length_257_cov_2.070652_g22949_i0 PRJNA745553 23144 257 2.070652 5.32157564 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 108 4.3e-25   NR XP_004342121.1 1257118 g22949 i0 51.9 0.945525291828794 81 39 94.6 0 243 1 680 760 XP_004342121.1 PH domain containing protein [Acanthamoeba castellanii str. Neff] diamond 243 108 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29042462 29042462 PRJNA745553_S_NODE_3528_length_562_cov_3.049080_g3343_i0 PRJNA745553 3528 562 3.04908 17.1358296 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 154 2.62e-41   NR XP_004367792.1 1257118 g3343 i0 49.3 0.790035587188612 148 74 79 1 557 114 172 318 XP_004367792.1 RNA ligase (ATP), putative [Acanthamoeba castellanii str. Neff] diamond 444 154 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29831600 29831600 PRJNA745553_S_NODE_5731_length_481_cov_2.500000_g5537_i0 PRJNA745553 5731 481 2.5 12.025 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 89 3.8e-17   NR XP_004339290.1 1257118 g5537 i0 45.3 1.54677754677755 117 62 72.3 2 481 134 202 317 XP_004339290.1 papain family cysteine protease [Acanthamoeba castellanii str. Neff] diamond 744 89 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30084221 30084221 PRJNA745553_S_NODE_14272_length_326_cov_1.521739_g14077_i0 PRJNA745553 14272 326 1.521739 4.96086914 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 103 1e-23   NR XP_004339984.1 1257118 g14077 i0 69.7 0.607361963190184 66 20 60.7 0 303 106 299 364 XP_004339984.1 uncharacterized protein ACA1_208450 [Acanthamoeba castellanii str. Neff] diamond 198 103 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30558089 30558089 PRJNA745553_S_NODE_6733_length_453_cov_4.342105_g6539_i0 PRJNA745553 6733 453 4.342105 19.66973565 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 189 4.7e-57   NR XP_004338965.1 1257118 g6539 i0 61.8 0.900662251655629 136 52 90.1 0 452 45 142 277 XP_004338965.1 methyltransferase [Acanthamoeba castellanii str. Neff] diamond 408 189 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30716142 30716142 PRJNA745553_S_NODE_13374_length_336_cov_5.231939_g13179_i0 PRJNA745553 13374 336 5.231939 17.57931504 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 88.6 7.38e-20   NR XP_004333881.1 1257118 g13179 i0 46.1 0.794642857142857 89 44 76.8 2 21 278 45 132 XP_004333881.1 Hypothetical protein ACA1_273800 [Acanthamoeba castellanii str. Neff] diamond 267 88.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31380068 31380068 PRJNA745553_S_NODE_10776_length_371_cov_2.395973_g10581_i0 PRJNA745553 10776 371 2.395973 8.88905983 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 98.2 1.59e-22   NR XP_004338209.1 1257118 g10581 i0 42.6 0.986522911051213 122 69 98.7 1 368 3 78 198 XP_004338209.1 eukaryotic translation initiation factor 3 subunit k, putative [Acanthamoeba castellanii str. Neff] diamond 366 98.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32107490 32107490 PRJNA745553_S_NODE_1898_length_663_cov_5.432203_g1731_i0 PRJNA745553 1898 663 5.432203 36.01550589 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 138 2.5099999999999996e-37   NR XP_004336688.1 1257118 g1731 i0 61.3 0.479638009049774 106 41 48 0 542 225 23 128 XP_004336688.1 LIM domain containing protein [Acanthamoeba castellanii str. Neff] diamond 318 138 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32149227 32149227 PRJNA745553_S_NODE_3338_length_571_cov_4.612450_g3155_i0 PRJNA745553 3338 571 4.61245 26.3370895 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 108 4.24e-24   NR XP_004337284.1 1257118 g3155 i0 55.3 1.88091068301226 94 42 49.4 0 33 314 348 441 XP_004337284.1 Nethylammeline chlorohydrolase [Acanthamoeba castellanii str. Neff] diamond 1074 108 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32455811 32455811 PRJNA745553_S_NODE_4639_length_517_cov_3.819820_g4449_i0 PRJNA745553 4639 517 3.81982 19.7484694 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 234 3.48e-73   NR XP_004340798.1 1257118 g4449 i0 68.9 1.86847195357834 161 49 92.8 1 1 480 222 382 XP_004340798.1 golgi family protein, putative [Acanthamoeba castellanii str. Neff] diamond 966 234 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;