RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA744060", tax_phylum = "Promethearchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Promethearchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA744060 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
723347 723347 PRJNA744060_P_NODE_36221_length_275_cov_1.341584_g35892_i0 PRJNA744060 36221 275 1.341584 3.689356 Promethearchaeota archaeon CR_4 1849166 Archaea Archaea 128 3.98e-33   NR OLS14603.1 1849166 g35892 i0 68.5 0.970909090909091 89 28 97.1 0 9 275 10 98 OLS14603.1 MAG: acetyl-CoA acetyltransferase [Promethearchaeota archaeon CR_4] diamond 267 128 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon CR_4
28600277 28600277 PRJNA744060_P_NODE_25127_length_324_cov_1.844622_g24798_i0 PRJNA744060 25127 324 1.844622 5.97657528 Promethearchaeota archaeon 2053489 Archaea Archaea 107 1.86e-24   NR TFG30480.1 2053489 g24798 i0 49.1 0.981481481481482 106 51 98.1 1 2 319 556 658 TFG30480.1 MAG: hypothetical protein EU532_00820 [Promethearchaeota archaeon] diamond 318 107 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;