RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA744060", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA744060 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4551840 4551840 PRJNA744060_P_NODE_32884_length_287_cov_1.219626_g32555_i0 PRJNA744060 32884 287 1.219626 3.50032662 Euphorbia ebracteolata waikavirus 3115786 Viruses Viruses 52.8 0.027   NTclustered gi|2752247976|tpg|BK065142.1| 3115786 g32555 i0 100 0.0975609756097561 28 0 10 0 247 274 8042 8015 TPA_asm: Euphorbia ebracteolata waikavirus polyprotein (ORF1) and hypothetical protein (ORFX) genes, complete cds blastn 28 52.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Waikavirus Euphorbia ebracteolata waikavirus
31664460 31664460 PRJNA744060_P_NODE_597_length_1569_cov_18.258021_g499_i0 PRJNA744060 597 1569 18.258021 286.46834949 Thelebolus microsporus partitivirus 1 2501047 Viruses Viruses 256 6.09e-75   NR AZT88598.1 2501047 g499 i0 37.4 0.852772466539197 446 252 83.4 7 1472 165 63 491 AZT88598.1 RNA-dependent RNA polymerase [Thelebolus microsporus partitivirus 1] diamond 1338 256 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Thelebolus microsporus partitivirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;