RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA744060" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA744060 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26672529 26672529 PRJNA744060_P_NODE_43801_length_253_cov_1.300000_g43472_i0 PRJNA744060 43801 253 1.3 3.289 Candidatus Minisyncoccus archaeophilus 3238481 Bacteria Bacteria 62.8 3.8e-9   NR WP_412732702.1 3238481 g43472 i0 37.8 2.92885375494071 82 50 97.2 1 4 249 971 1051 WP_412732702.1 glycine-rich domain-containing protein [Minisyncoccus archaeophilus] diamond 741 62.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Minisyncoccales Minisyncoccaceae Minisyncoccus Minisyncoccus archaeiphilus
27084379 27084379 PRJNA744060_P_NODE_3522_length_831_cov_5.839050_g3249_i0 PRJNA744060 3522 831 5.83905 48.5225055 Minisyncoccota bacterium 2053589 Bacteria Bacteria 75.1 5.9e-12   NR HUS51518.1 2053589 g3249 i0 29.1 0.620938628158845 172 116 61.4 3 769 260 64 231 HUS51518.1 glycoside hydrolase family protein [Candidatus Paceibacterota bacterium] diamond 516 75.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27747861 27747861 PRJNA744060_P_NODE_22484_length_342_cov_1.159851_g22155_i0 PRJNA744060 22484 342 1.159851 3.96669042 Minisyncoccota bacterium 2053589 Bacteria Bacteria 55.5 4.33e-6   NR MDD5165675.1 2053589 g22155 i0 27.6 1.07894736842105 123 77 97.4 2 1 333 967 1089 MDD5165675.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 369 55.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28726523 28726523 PRJNA744060_P_NODE_53407_length_231_cov_5.620253_g53078_i0 PRJNA744060 53407 231 5.620253 12.98278443 Candidatus Spechtbacterales bacterium 3085100 Bacteria Bacteria 44.3 0.00885   NR MDX1535955.1 3085100 g53078 i0 35.7 0.727272727272727 56 36 72.7 0 40 207 5 60 MDX1535955.1 NUDIX domain-containing protein [Candidatus Spechtbacterales bacterium] diamond 168 44.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota   Candidatus Spechtbacterales     Candidatus Spechtbacterales bacterium
28820918 28820918 PRJNA744060_P_NODE_51248_length_242_cov_0.923077_g50919_i0 PRJNA744060 51248 242 0.923077 2.23384634 Minisyncoccota bacterium 2053589 Bacteria Bacteria 45.4 0.00406   NR MBP9836420.1 2053589 g50919 i0 72.4 1.38842975206612 29 8 36 0 242 156 156 184 MBP9836420.1 DUF285 domain-containing protein [Candidatus Paceibacterota bacterium] diamond 336 45.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29926470 29926470 PRJNA744060_P_NODE_31051_length_294_cov_2.244344_g30722_i0 PRJNA744060 31051 294 2.244344 6.59837136 Minisyncoccota bacterium 2053589 Bacteria Bacteria 126 1.17e-32   NR MEX0595889.1 2053589 g30722 i0 55.7 1.97959183673469 97 42 99 1 293 3 199 294 MEX0595889.1 endonuclease/exonuclease/phosphatase family protein [Candidatus Paceibacterota bacterium] diamond 582 126 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30495191 30495191 PRJNA744060_P_NODE_52213_length_238_cov_2.327273_g51884_i0 PRJNA744060 52213 238 2.327273 5.53890974 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.5 0.00524   NR MDR3570671.1 2053589 g51884 i0 52.7 0.69327731092437 55 20 61.8 3 218 72 52 106 MDR3570671.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 165 43.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;