RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA744060" and tax_phylum = "Candidatus Spechtiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Spechtiibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA744060 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28600283 28600283 PRJNA744060_P_NODE_27867_length_309_cov_1.322034_g27538_i0 PRJNA744060 27867 309 1.322034 4.08508506 Candidatus Spechtbacteria bacterium 2750079 Bacteria Bacteria 127 5.6199999999999996e-34   NR MBI2463034.1 2750079 g27538 i0 63.4 0.980582524271845 101 35 98.1 1 3 305 72 170 MBI2463034.1 NUDIX domain-containing protein [Candidatus Spechtbacteria bacterium] diamond 303 127 1 Bacteria Bacteria candidate phyla   Candidatus Spechtiibacteriota         Candidatus Spechtbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;