RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA744060" and tax_phylum = "Candidatus Nomuraibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA744060 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27747922 27747922 PRJNA744060_P_NODE_984_length_1362_cov_4.715283_g852_i0 PRJNA744060 984 1362 4.715283 64.22215446 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 353 4.94e-116   NR MCC6198803.1 2052152 g852 i0 56.7 4.29515418502203 319 134 70.3 4 45 1001 16 330 MCC6198803.1 arginine kinase [Candidatus Nomurabacteria bacterium] diamond 5850 353 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
30842726 30842726 PRJNA744060_P_NODE_814_length_1440_cov_6.532553_g695_i0 PRJNA744060 814 1440 6.532553 94.0687632 Candidatus Nomurabacteria bacterium GW2 2052152 Bacteria Bacteria 368 2.8199999999999998e-121   NR KKQ34707.1 1618742 g695 i0 54.9 2.07291666666667 337 147 69.8 3 1349 345 2 335 KKQ34707.1 MAG: hypothetical protein US50_C0039G0003 [Candidatus Nomurabacteria bacterium GW2011_GWB1_37_5] diamond 2985 368 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium GW2011_GWB1_37_5
31980799 31980799 PRJNA744060_P_NODE_53718_length_230_cov_2.464968_g53389_i0 PRJNA744060 53718 230 2.464968 5.6694264 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 48.1 3.91e-4   NR USN97746.1 2052152 g53389 i0 38.5 1.01739130434783 78 43 99.1 2 2 229 341 415 USN97746.1 MAG: translation initiation factor IF-2 [Candidatus Nomurabacteria bacterium] diamond 234 48.1 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;