RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA744060" and tax_phylum = "Candidatus Bipolaricaulota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Bipolaricaulota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA744060 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23676073 23676073 PRJNA744060_P_NODE_18959_length_371_cov_1.664430_g18630_i0 PRJNA744060 18959 371 1.66443 6.1750353 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 122 4.81e-33   NR MCK4682735.1 2306012 g18630 i0 51.2 7.66576819407008 121 56 95.4 1 356 3 3 123 MCK4682735.1 30S ribosomal protein S9 [Candidatus Bipolaricaulota bacterium] diamond 2844 122 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
29704848 29704848 PRJNA744060_P_NODE_47930_length_247_cov_0.896552_g47601_i0 PRJNA744060 47930 247 0.896552 2.21448344 Candidatus Acetothermia bacterium 2053493 Bacteria Bacteria 87.4 2.06e-20   NR HHE47827.1 2053493 g47601 i0 66.7 1.53036437246964 63 21 76.5 0 239 51 26 88 HHE47827.1 30S ribosomal protein S15 [Candidatus Acetothermia bacterium] diamond 378 87.4 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Acetothermia bacterium
31000653 31000653 PRJNA744060_P_NODE_36414_length_274_cov_1.940299_g36085_i0 PRJNA744060 36414 274 1.940299 5.31641926 Candidatus Bipolaricaulia bacterium 3121610 Bacteria Bacteria 46.6 0.00234   NR MFB6290505.1 3121610 g36085 i0 31.3 1.88321167883212 83 56 90.9 1 3 251 627 708 MFB6290505.1 glycoside hydrolase family 2 protein [Candidatus Bipolaricaulia bacterium] diamond 516 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota Candidatus Bipolaricaulia       Candidatus Bipolaricaulia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;