RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA744060", tax_kingdom = "Nanobdellati" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 4 ✖

tax_kingdom 1

  • Nanobdellati · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA744060 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27347345 27347345 PRJNA744060_P_NODE_21863_length_346_cov_2.025641_g21534_i0 PRJNA744060 21863 346 2.025641 7.00871786 root 1 Root_unresolved Root_unresolved 73.6 1.09e-12   NR MEW6295755.1 2026736 g21534 i0 32.4 2.86994219653179 108 70 91 1 3 317 6 113 MEW6295755.1 GDP-mannose 4,6-dehydratase [Candidatus Iainarchaeum archaeon] diamond 993 73.9 0.995940460081191 Archaea   Nanobdellati Candidatus Iainarchaeota       Candidatus Iainarchaeum Candidatus Iainarchaeum archaeon
30052517 30052517 PRJNA744060_P_NODE_21511_length_349_cov_1.391304_g21182_i0 PRJNA744060 21511 349 1.391304 4.85565096 Candidatus Micrarchaeaceae archaeon 2953041 Archaea Archaea 45.4 0.0018   NR MEM4065528.1 2953041 g21182 i0 39.1 1.17765042979943 69 38 59.3 2 141 347 1 65 MEM4065528.1 HU family DNA-binding protein [Candidatus Micrarchaeaceae archaeon] diamond 411 45.4 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Micrarchaeales Candidatus Micrarchaeaceae   Candidatus Micrarchaeaceae archaeon
31885912 31885912 PRJNA744060_P_NODE_33817_length_283_cov_2.219048_g33488_i0 PRJNA744060 33817 283 2.219048 6.27990584 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 57.8 2.98e-7   NR MCF7910788.1 2026773 g33488 i0 42.5 2.42756183745583 73 40 77.4 1 281 63 241 311 MCF7910788.1 FG-GAP repeat protein [Candidatus Pacearchaeota archaeon] diamond 687 57.8 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
32465714 32465714 PRJNA744060_P_NODE_999_length_1356_cov_13.367888_g866_i0 PRJNA744060 999 1356 13.367888 181.26856128 Nanobdellati 1783276 Archaea Archaea 576 1.7299999999999995e-202   NR MEK6921002.1 2026764 g866 i0 67.6 6.59734513274336 426 130 94.2 4 1326 49 3 420 MEK6921002.1 adenosylhomocysteinase [Nanoarchaeota archaeon] diamond 8946 576 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;