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contig_metadata

18 rows where bioproject = "PRJNA744060" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 18 ✖

tax_clade 1

bioproject 1

  • PRJNA744060 · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24949623 24949623 PRJNA744060_P_NODE_22260_length_343_cov_3.174074_g21931_i0 PRJNA744060 22260 343 3.174074 10.88707382 uncultured Methanoregulaceae archaeon 1392423 Archaea Archaea 198 3.94e-46   NTclustered gi|2874254037|emb|OY970361.1| 1392423 g21931 i0 85.714 46.3119533527697 189 25 55 2 49 236 2544725 2544912 MAG: uncultured Methanoregulaceae archaeon isolate MFD01476.bin.2.40 genome assembly, chromosome: 1 blastn 15885 198 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   uncultured Methanoregulaceae archaeon
24949793 24949793 PRJNA744060_P_NODE_31360_length_293_cov_1.418182_g31031_i0 PRJNA744060 31360 293 1.418182 4.15527326 Haloferax mediterranei 2252 Archaea Archaea 54.7 0.008   NTclustered gi|640913992|gb|CP001868.2| 523841 g31031 i0 94.444 0.368600682593857 36 1 12 1 47 82 1848311 1848345 Haloferax mediterranei ATCC 33500, complete genome blastn 108 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax Haloferax mediterranei
24950063 24950063 PRJNA744060_P_NODE_48340_length_246_cov_1.323699_g48011_i0 PRJNA744060 48340 246 1.323699 3.25629954 Haloarcula regularis 3033392 Archaea Archaea 58.4 4.78e-4   NTclustered gi|2463595545|gb|CP119794.1| 3033392 g48011 i0 100 0.601626016260163 31 0 13 0 216 246 814474 814444 Haloarcula regularis strain SYNS111 chromosome, complete genome blastn 148 58.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula regularis
26641129 26641129 PRJNA744060_P_NODE_28641_length_305_cov_1.771552_g28312_i0 PRJNA744060 28641 305 1.771552 5.4032336 Thermoplasmata archaeon 1906666 Archaea Archaea 64.3 1.98e-9   NR UCE36149.1 1906666 g28312 i0 46 1.22950819672131 63 33 62 1 191 3 238 299 UCE36149.1 MAG: hypothetical protein JSW00_11420 [Thermoplasmata archaeon] diamond 375 64.3 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
26841420 26841420 PRJNA744060_P_NODE_50541_length_243_cov_0.917647_g50212_i0 PRJNA744060 50541 243 0.917647 2.22988221 Methanobacteriati 3366610 Archaea Archaea 120 4.55e-31   NR MBH33411.1 2026739 g50212 i0 73.8 5.92592592592593 80 16 98.8 1 242 3 183 257 MBH33411.1 3,4-dihydroxy-2-butanone-4-phosphate synthase [Methanobacteriota archaeon] diamond 1440 120 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
27021112 27021112 PRJNA744060_P_NODE_51022_length_242_cov_1.775148_g50693_i0 PRJNA744060 51022 242 1.775148 4.29585816 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 47.4 8.71e-4   NR MEL0267202.1 2163009 g50693 i0 26.9 1.89669421487603 78 54 93 1 17 241 372 449 MEL0267202.1 hypothetical protein [Candidatus Poseidoniales archaeon] diamond 459 47.4 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
27283984 27283984 PRJNA744060_P_NODE_51343_length_242_cov_0.923077_g51014_i0 PRJNA744060 51343 242 0.923077 2.23384634 Halobacteriales 2235 Archaea Archaea 80.9 1.37e-15   NR WP_263017800.1 1679076 g51014 i0 44.6 2.78925619834711 74 41 91.7 0 4 225 144 217 WP_263017800.1 beta-mannosidase [Natronobiforma cellulositropha] diamond 675 80.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronobiforma Natronobiforma cellulositropha
27811046 27811046 PRJNA744060_P_NODE_46184_length_249_cov_2.159091_g45855_i0 PRJNA744060 46184 249 2.159091 5.37613659 Methanosarcinales archaeon 2250255 Archaea Archaea 122 1.38e-30   NR RYE85578.1 2250255 g45855 i0 68.3 0.987951807228916 82 26 98.8 0 2 247 177 258 RYE85578.1 MAG: hypothetical protein EOO65_00010 [Methanosarcinales archaeon] diamond 246 122 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
28294339 28294339 PRJNA744060_P_NODE_12426_length_455_cov_2.018325_g12098_i0 PRJNA744060 12426 455 2.018325 9.18337875 Methanosarcina 2207 Archaea Archaea 76.3 2.39e-13   NR WP_300098040.1 2213 g12098 i0 41.3 4.06153846153846 104 57 67.9 3 367 59 173 273 WP_300098040.1 protease inhibitor I42 family protein [Methanosarcina sp.] diamond 1848 77 0.990909090909091 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
28316067 28316067 PRJNA744060_P_NODE_34126_length_282_cov_1.636364_g33797_i0 PRJNA744060 34126 282 1.636364 4.61454648 Methanobacteriota archaeon 2026739 Archaea Archaea 84.3 1.41e-16   NR RMG31918.1 2026739 g33797 i0 48.8 0.914893617021277 86 41 91.5 1 277 20 936 1018 RMG31918.1 MAG: hypothetical protein D6732_14205 [Methanobacteriota archaeon] diamond 258 84.3 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28979222 28979222 PRJNA744060_P_NODE_43248_length_254_cov_1.767956_g42919_i0 PRJNA744060 43248 254 1.767956 4.49060824 Methanoregula sp. 2052170 Archaea Archaea 42.4 0.0465   NR MCX6686830.1 2052170 g42919 i0 30 0.826771653543307 70 49 82.7 0 13 222 79 148 MCX6686830.1 DNA double-strand break repair nuclease NurA [Methanoregula sp.] diamond 210 42.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
29831508 29831508 PRJNA744060_P_NODE_15131_length_413_cov_1.361765_g14802_i0 PRJNA744060 15131 413 1.361765 5.62408945 Methanobacteriota archaeon 2026739 Archaea Archaea 172 1.0399999999999999e-46   NR MAD56215.1 2026739 g14802 i0 59.9 1.85956416464891 137 51 99.5 1 3 413 469 601 MAD56215.1 hypothetical protein [Methanobacteriota archaeon] diamond 768 172 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
30084163 30084163 PRJNA744060_P_NODE_26892_length_314_cov_1.763485_g26563_i0 PRJNA744060 26892 314 1.763485 5.5373429 Thermoplasmata archaeon 1906666 Archaea Archaea 51.2 6.85e-5   NR MEM4728455.1 1906666 g26563 i0 40.3 1.29936305732484 62 36 59.2 1 312 127 174 234 MEM4728455.1 PAC2 family protein [Thermoplasmata archaeon] diamond 408 51.2 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
30178972 30178972 PRJNA744060_P_NODE_2812_length_917_cov_10.161137_g2562_i0 PRJNA744060 2812 917 10.161137 93.17762629 Methanobacteriota archaeon 2026739 Archaea Archaea 221 1.8e-64   NR PXF22894.1 2026739 g2562 i0 57 1.29225736095965 193 80 63.1 3 160 738 38 227 PXF22894.1 MAG: hypothetical protein CXX71_03015 [Methanobacteriota archaeon] diamond 1185 221 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31832527 31832527 PRJNA744060_P_NODE_47717_length_247_cov_0.896552_g47388_i0 PRJNA744060 47717 247 0.896552 2.21448344 Archaea 2157 Archaea Archaea 61.6 6.92e-9   NR MDI9642494.1 2250258 g47388 i0 40.5 1.93117408906883 79 43 96 1 2 238 125 199 MDI9642494.1 alpha/beta hydrolase [Archaeoglobales archaeon] diamond 477 61.6 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales     Archaeoglobales archaeon
32170971 32170971 PRJNA744060_P_NODE_34718_length_280_cov_1.449275_g34389_i0 PRJNA744060 34718 280 1.449275 4.05797 Methanosarcinales archaeon 2250255 Archaea Archaea 129 1.1399999999999999e-32   NR RYE85578.1 2250255 g34389 i0 65.5 0.9 84 27 87.9 1 30 275 19 102 RYE85578.1 MAG: hypothetical protein EOO65_00010 [Methanosarcinales archaeon] diamond 252 129 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
32812309 32812309 PRJNA744060_P_NODE_20600_length_356_cov_2.056537_g20271_i0 PRJNA744060 20600 356 2.056537 7.32127172 root 1 Root_unresolved Root_unresolved 67.8 2.43e-10   NR OPX78749.1 1811685 g20271 i0 41.2 6.37078651685393 102 54 85.1 4 8 310 1769 1865 OPX78749.1 MAG: HYR domain protein [Methanosaeta sp. PtaB.Bin039] diamond 2268 68.2 0.994134897360704 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanosaeta sp. PtaB.Bin039
32896681 32896681 PRJNA744060_P_NODE_20260_length_359_cov_1.790210_g19931_i0 PRJNA744060 20260 359 1.79021 6.4268539 Methanovulcanius yangii 1789227 Archaea Archaea 46.2 0.00879   NR MBT8507577.1 1789227 g19931 i0 30.4 1.92200557103064 115 62 96.1 3 348 4 1357 1453 MBT8507577.1 hypothetical protein [Methanovulcanius yangii] diamond 690 46.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanovulcanius Methanovulcanius yangii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;