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contig_metadata

9 rows where bioproject = "PRJNA744060", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 9 ✖

tax_kingdom 1

  • Bacillati · 9 ✖

bioproject 1

  • PRJNA744060 · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3274726 3274726 PRJNA744060_P_NODE_36703_length_273_cov_2.130000_g36374_i0 PRJNA744060 36703 273 2.13 5.8149 Metamycoplasma gateae 35769 Bacteria Bacteria 58.4 5.39e-4   NTclustered gi|2668340636|gb|CP143578.1| 35769 g36374 i0 100 0.113553113553114 31 0 11 0 228 258 496490 496460 Metamycoplasma gateae strain 3700 chromosome, complete genome blastn 31 58.4 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Metamycoplasma Metamycoplasma gateae
4551728 4551728 PRJNA744060_P_NODE_2604_length_950_cov_6.110604_g2360_i0 PRJNA744060 2604 950 6.110604 58.050738 Mycoplasmopsis edwardii 53558 Bacteria Bacteria 255 6.83e-63   NTclustered gi|2425261263|gb|CP114370.1| 53558 g2360 i0 74.351 2.53263157894737 655 142 83 21 201 843 350762 350122 Mycoplasmopsis edwardii strain felid995 chromosome, complete genome blastn 2406 255 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mycoplasmopsis Mycoplasmopsis edwardii
5026746 5026746 PRJNA744060_P_NODE_22744_length_340_cov_1.468165_g22415_i0 PRJNA744060 22744 340 1.468165 4.991761 Mycoplasmopsis 2767358 Bacteria Bacteria 628 1.1699999999999999e-175   NTclustered gi|2639791867|gb|CP141038.1| 171284 g22415 i0 100 211.120588235294 340 0 100 0 1 340 414755 415094 Mycoplasmopsis cynos strain 64228 chromosome, complete genome blastn 71781 628 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mycoplasmopsis Mycoplasmopsis cynos
6302563 6302563 PRJNA744060_P_NODE_9525_length_518_cov_5.476404_g9198_i0 PRJNA744060 9525 518 5.476404 28.36777272 Mycoplasmopsis 2767358 Bacteria Bacteria 56.5 0.004   NTclustered gi|2639791867|gb|CP141038.1| 171284 g9198 i0 100 1.56370656370656 30 0 6 0 428 457 367271 367300 Mycoplasmopsis cynos strain 64228 chromosome, complete genome blastn 810 56.5 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mycoplasmopsis Mycoplasmopsis cynos
9651570 9651570 PRJNA744060_P_NODE_21348_length_350_cov_2.061372_g21019_i0 PRJNA744060 21348 350 2.061372 7.214802 Mesomycoplasma lagogenitalium 171286 Bacteria Bacteria 54.7 0.009   NTclustered gi|2495165145|gb|CP122979.1| 171286 g21019 i0 100 0.082857142857142893 29 0 8 0 219 247 615578 615550 Mesomycoplasma lagogenitalium strain 12MS chromosome, complete genome blastn 29 54.7 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma lagogenitalium
18575282 18575282 PRJNA744060_P_NODE_50035_length_243_cov_6.029412_g49706_i0 PRJNA744060 50035 243 6.029412 14.65147116 Mycoplasmopsis maculosa 114885 Bacteria Bacteria 67.6 7.82e-7   NTclustered gi|1563804680|emb|LR215037.1| 114885 g49706 i0 93.333 0.185185185185185 45 3 19 0 194 238 310496 310452 Mycoplasma maculosum strain NCTC10168 genome assembly, chromosome: 1 blastn 45 67.6 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mycoplasmopsis Mycoplasmopsis maculosa
26641186 26641186 PRJNA744060_P_NODE_9421_length_521_cov_3.500000_g9095_i0 PRJNA744060 9421 521 3.5 18.235 Acholeplasmataceae bacterium 1898209 Bacteria Bacteria 55.8 9.03e-6   NR MDX9692186.1 1898209 g9095 i0 56.1 0.236084452975048 41 18 23.6 0 519 397 73 113 MDX9692186.1 tetratricopeptide repeat protein [Acholeplasmataceae bacterium] diamond 123 55.8 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae   Acholeplasmataceae bacterium
27716486 27716486 PRJNA744060_P_NODE_38884_length_266_cov_2.290155_g38555_i0 PRJNA744060 38884 266 2.290155 6.0918123 Mycoplasmopsis bovis 28903 Bacteria Bacteria 40.4 0.0286   NR QQH29161.1 28903 g38555 i0 63 0.304511278195489 27 10 30.5 0 264 184 4 30 QQH29161.1 BspA family leucine-rich repeat surface protein [Mycoplasmopsis bovis] diamond 81 40.4 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mycoplasmopsis Mycoplasmopsis bovis
27779361 27779361 PRJNA744060_P_NODE_19404_length_367_cov_1.057823_g19075_i0 PRJNA744060 19404 367 1.057823 3.88221041 Spiroplasma endosymbiont of Danaus chrysippus 2691041 Bacteria Bacteria 44.3 0.0442   NR WP_174480205.1 2691041 g19075 i0 28.2 0.956403269754768 117 69 94 4 348 4 1040 1143 WP_174480205.1 hypothetical protein [Spiroplasma endosymbiont of Danaus chrysippus] diamond 351 44.3 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Entomoplasmatales Spiroplasmataceae Spiroplasma Spiroplasma endosymbiont of Danaus chrysippus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;