RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA744060", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 8 ✖

tax_kingdom 1

  • Bacillati · 8 ✖

bioproject 1

  • PRJNA744060 · 8 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26863242 26863242 PRJNA744060_P_NODE_53921_length_229_cov_2.544872_g53592_i0 PRJNA744060 53921 229 2.544872 5.82775688 Armatimonadota bacterium 2033014 Bacteria Bacteria 52 1.66e-5   NR HEY3284726.1 2033014 g53592 i0 40.3 0.812227074235808 62 31 81.2 1 227 42 589 644 HEY3284726.1 dockerin type I domain-containing protein [Armatimonadota bacterium] diamond 186 52 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27536699 27536699 PRJNA744060_P_NODE_2523_length_964_cov_4.193042_g2282_i0 PRJNA744060 2523 964 4.193042 40.42092488 PVC group 1783257 Bacteria Bacteria 56.6 7.65e-5   NR NLH99045.1 2282151 g2282 i0 57.9 0.454356846473029 38 16 11.8 0 4 117 283 320 NLH99045.1 protein kinase [Chthonomonadales bacterium] diamond 438 56.6 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
28252764 28252764 PRJNA744060_P_NODE_11986_length_463_cov_1.000000_g11658_i0 PRJNA744060 11986 463 1 4.63 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 89.4 2.34e-17   NR MFN8220026.1 2682145 g11658 i0 42 0.894168466522678 138 64 89.4 2 453 40 785 906 MFN8220026.1 tandem-95 repeat protein [Fimbriimonadales bacterium] diamond 414 89.4 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
28473925 28473925 PRJNA744060_P_NODE_14226_length_426_cov_1.090652_g13897_i0 PRJNA744060 14226 426 1.090652 4.64617752 Armatimonadota bacterium 2033014 Bacteria Bacteria 52.4 1.17e-4   NR HUV04759.1 2033014 g13897 i0 32.2 1.55633802816901 115 75 80.3 3 343 2 254 366 HUV04759.1 tetratricopeptide repeat protein [Armatimonadota bacterium] diamond 663 52.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28695131 28695131 PRJNA744060_P_NODE_9707_length_514_cov_3.582766_g9380_i0 PRJNA744060 9707 514 3.582766 18.41541724 Armatimonadota bacterium 2033014 Bacteria Bacteria 170 2.0199999999999998e-46   NR MCB0826406.1 2033014 g9380 i0 52 2.00194552529183 171 60 99.8 3 2 514 377 525 MCB0826406.1 alpha amylase C-terminal domain-containing protein [Armatimonadota bacterium] diamond 1029 170 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28820930 28820930 PRJNA744060_P_NODE_8848_length_537_cov_3.711207_g8523_i0 PRJNA744060 8848 537 3.711207 19.92918159 Armatimonadota bacterium 2033014 Bacteria Bacteria 73.6 1.39e-11   NR MBM3465436.1 2033014 g8523 i0 36.8 0.653631284916201 117 72 64.8 2 358 11 117 232 MBM3465436.1 DUF1565 domain-containing protein [Armatimonadota bacterium] diamond 351 73.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30021254 30021254 PRJNA744060_P_NODE_23731_length_333_cov_2.173077_g23402_i0 PRJNA744060 23731 333 2.173077 7.23634641 Chthonomonadales bacterium 2282151 Bacteria Bacteria 61.2 4.32e-9   NR HEV2472425.1 2282151 g23402 i0 38.2 3.53153153153153 102 47 82.9 2 279 4 36 131 HEV2472425.1 universal stress protein [Chthonomonadales bacterium] diamond 1176 61.2 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
32012564 32012564 PRJNA744060_P_NODE_24818_length_326_cov_1.948617_g24489_i0 PRJNA744060 24818 326 1.948617 6.35249142 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 52 5.57e-5   NR HLK60280.1 2739509 g24489 i0 37.6 0.782208588957055 85 49 78.2 2 62 316 456 536 HLK60280.1 SBBP repeat-containing protein [Chthonomonadaceae bacterium] diamond 255 52 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;