RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA744060", tax_clade = "FCB group" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA744060 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27147080 27147080 PRJNA744060_P_NODE_39382_length_265_cov_1.260417_g39053_i0 PRJNA744060 39382 265 1.260417 3.34010505 Fibrobacteria bacterium 2725311 Bacteria Bacteria 67 1.42e-10   NR HNY30899.1 2725311 g39053 i0 44.1 1.53962264150943 68 38 77 0 2 205 839 906 HNY30899.1 glycosyltransferase [Fibrobacteria bacterium] diamond 408 67 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
31189780 31189780 PRJNA744060_P_NODE_37075_length_272_cov_1.567839_g36746_i0 PRJNA744060 37075 272 1.567839 4.26452208 Chitinispirillaceae bacterium 2813024 Bacteria Bacteria 52.4 2.19e-5   NR MBN2036291.1 2813024 g36746 i0 54.8 1.35661764705882 42 19 46.3 0 5 130 55 96 MBN2036291.1 caspase family protein [Chitinispirillaceae bacterium] diamond 369 52.4 1 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinispirillia Chitinispirillales Chitinispirillaceae   Chitinispirillaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;