RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA744060", tax_clade = "FCB group" and tax_phylum = "Candidatus Latescibacterota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA744060 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13477153 13477153 PRJNA744060_P_NODE_33951_length_283_cov_1.238095_g33622_i0 PRJNA744060 33951 283 1.238095 3.50380885 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 254 6.67e-63   NTclustered gi|2874254090|emb|OY970173.1| 2053570 g33622 i0 83.154 309.731448763251 279 45 98 2 5 282 1539309 1539586 MAG: Candidatus Latescibacteria bacterium isolate MFD02242.bin.1.32 genome assembly, chromosome: 1 blastn 87654 254 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
26735744 26735744 PRJNA744060_P_NODE_25781_length_320_cov_2.113360_g25452_i0 PRJNA744060 25781 320 2.11336 6.762752 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 119 5.8399999999999995e-30   NR MDP6037570.1 2053570 g25452 i0 58.9 1.771875 95 39 89.1 0 301 17 212 306 MDP6037570.1 YciI family protein [Candidatus Latescibacterota bacterium] diamond 567 119 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
29515612 29515612 PRJNA744060_P_NODE_32270_length_289_cov_2.157407_g31941_i0 PRJNA744060 32270 289 2.157407 6.23490623 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 99.4 8.07e-22   NR MFA6470921.1 2053570 g31941 i0 48.9 0.975778546712803 94 48 97.6 0 6 287 445 538 MFA6470921.1 DUF5906 domain-containing protein [Candidatus Latescibacterota bacterium] diamond 282 99.4 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;