RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA744060", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA744060 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27400460 27400460 PRJNA744060_P_NODE_15103_length_413_cov_2.782353_g14774_i0 PRJNA744060 15103 413 2.782353 11.49111789 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 96.3 6.61e-22   NR HPO16680.1 2030809 g14774 i0 48.2 0.799031476997579 110 53 77 2 16 333 65 174 HPO16680.1 lipocalin family protein [Candidatus Hydrogenedentota bacterium] diamond 330 96.3 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28199506 28199506 PRJNA744060_P_NODE_17646_length_383_cov_4.012903_g17317_i0 PRJNA744060 17646 383 4.012903 15.36941849 Candidatus Hydrogenedens 1462415 Bacteria Bacteria 105 1.22e-26   NR MCX8065013.1 2030809 g17317 i0 63.4 1.93472584856397 82 29 63.4 1 289 47 5 86 MCX8065013.1 acyl-CoA-binding protein [Candidatus Hydrogenedentota bacterium] diamond 741 105 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29294757 29294757 PRJNA744060_P_NODE_20969_length_353_cov_2.210714_g20640_i0 PRJNA744060 20969 353 2.210714 7.80382042 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 49.3 1.46e-4   NR MBI4559964.1 2030809 g20640 i0 57.5 0.679886685552408 40 17 34 0 349 230 64 103 MBI4559964.1 ankyrin repeat domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 240 49.3 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;