RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA744060", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA744060 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29841602 29841602 PRJNA744060_P_NODE_14011_length_429_cov_1.345506_g13682_i0 PRJNA744060 14011 429 1.345506 5.77222074 Bacteria 2 Bacteria Bacteria 111 2.29e-25   NR MCA9786564.1 2030808 g13682 i0 39.7 2.96503496503496 141 78 97.2 3 424 8 240 375 MCA9786564.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 1272 111 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
30789396 30789396 PRJNA744060_P_NODE_43514_length_253_cov_2.866667_g43185_i0 PRJNA744060 43514 253 2.866667 7.25266751 Candidatus Syntrophosphaera 2593013 Bacteria Bacteria 63.2 3.25e-10   NR PKN79692.1 2013733 g43185 i0 54.2 2.95256916996047 59 27 70 0 22 198 8 66 PKN79692.1 MAG: 50S ribosomal protein L9 [Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-1] diamond 747 63.2 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;