RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA744060", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA744060 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10926984 10926984 PRJNA744060_P_NODE_18629_length_374_cov_1.727575_g18300_i0 PRJNA744060 18629 374 1.727575 6.4611305 Bacteria 2 Bacteria Bacteria 185 1.59e-54   NR MEA2627152.1 2528255 g18300 i0 72.6 1.98930481283422 124 34 99.5 0 372 1 93 216 MEA2627152.1 isovaleryl-CoA dehydrogenase [Candidatus Binatota bacterium] diamond 744 186 0.99462365591397806 Bacteria Bacteria candidate phyla   Candidatus Binatota         Candidatus Binatota bacterium
31189761 31189761 PRJNA744060_P_NODE_28915_length_304_cov_1.082251_g28586_i0 PRJNA744060 28915 304 1.082251 3.29004304 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 111 2.03e-26   NR HEY7713563.1 2838779 g28586 i0 51.6 0.9375 95 46 93.8 0 303 19 141 235 HEY7713563.1 M20 family peptidase [Candidatus Binatia bacterium] diamond 285 111 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31253413 31253413 PRJNA744060_P_NODE_8755_length_540_cov_1.655246_g8430_i0 PRJNA744060 8755 540 1.655246 8.9383284 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 142 1.2799999999999998e-35   NR MFB3109228.1 2838779 g8430 i0 44 2.92777777777778 175 96 96.7 2 533 12 488 661 MFB3109228.1 M1 family metallopeptidase [Candidatus Binatia bacterium] diamond 1581 142 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;