RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA743294" and tax_phylum = "Vulcanimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA743294 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7100858 7100858 PRJNA743294_P_NODE_47386_length_252_cov_0.871508_g46930_i0 PRJNA743294 47386 252 0.871508 2.19620016 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 54.7 0.006   NTclustered gi|2874253986|emb|OY970311.1| 3107663 g46930 i0 96.875 0.126984126984127 32 1 13 0 165 196 3057048 3057079 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD04463.bin.c.13 genome assembly, chromosome: 1 blastn 32 54.7 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
16024503 16024503 PRJNA743294_P_NODE_18853_length_373_cov_1.026667_g18397_i0 PRJNA743294 18853 373 1.026667 3.82946791 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 551 2.8699999999999992e-152   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g18397 i0 93.316 560.584450402145 374 23 100 2 1 373 5032456 5032084 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 209098 551 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
31063927 31063927 PRJNA743294_P_NODE_54475_length_244_cov_0.912281_g54019_i0 PRJNA743294 54475 244 0.912281 2.22596564 Candidatus Baltobacteraceae bacterium 3107660 Bacteria Bacteria 55.1 1.72e-6   NR HUY70101.1 2952909 g54019 i0 53.7 1.3155737704918 54 23 63.9 1 4 159 349 402 HUY70101.1 STT3 domain-containing protein [Candidatus Baltobacteraceae bacterium] diamond 321 55.1 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae   Candidatus Baltobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;