RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA743294" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA743294 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29178644 29178644 PRJNA743294_P_NODE_48649_length_250_cov_1.514124_g48193_i0 PRJNA743294 48649 250 1.514124 3.78531 root 1 Root_unresolved Root_unresolved 51.6 2.73e-5   NR RLF47688.1 1906666 g48193 i0 40.3 4.848 62 37 74.4 0 1 186 121 182 RLF47688.1 MAG: hypothetical protein DRN20_05625 [Thermoplasmata archaeon] diamond 1212 51.6 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
29926395 29926395 PRJNA743294_P_NODE_38811_length_272_cov_2.080402_g38355_i0 PRJNA743294 38811 272 2.080402 5.65869344 Methanomassiliicoccus sp. 2528041 Archaea Archaea 43.5 0.0264   NR MDW5563620.1 2528041 g38355 i0 39.3 0.981617647058823 89 38 80.5 4 9 227 134 222 MDW5563620.1 ribonuclease Z [Methanomassiliicoccus sp.] diamond 267 43.5 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Methanomassiliicoccus Methanomassiliicoccus sp.
30400642 30400642 PRJNA743294_P_NODE_36353_length_280_cov_1.502415_g35897_i0 PRJNA743294 36353 280 1.502415 4.206762 Thermoplasmata archaeon 1906666 Archaea Archaea 55.5 1.92e-6   NR HLE45557.1 1906666 g35897 i0 34.2 1.63928571428571 76 50 81.4 0 277 50 344 419 HLE45557.1 aldehyde dehydrogenase family protein [Thermoplasmata archaeon] diamond 459 55.5 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;