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contig_metadata

26 rows where bioproject = "PRJNA743294" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 26 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA743294 · 26 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5825448 5825448 PRJNA743294_P_NODE_10265_length_494_cov_1.802850_g9809_i0 PRJNA743294 10265 494 1.80285 8.906079 Chlamydiales bacterium 2047757 Bacteria Bacteria 192 2.9e-54   NR MFT5319030.1 2047757 g9809 i0 52.5 0.983805668016194 162 64 92.9 2 8 466 196 353 MFT5319030.1 5-histidylcysteine sulfoxide synthase/putative 4-mercaptohistidine N1-methyltransferase [Chlamydiales bacterium] diamond 486 192 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
10926088 10926088 PRJNA743294_P_NODE_47289_length_252_cov_0.871508_g46833_i0 PRJNA743294 47289 252 0.871508 2.19620016 Chlamydia trachomatis 813 Bacteria Bacteria 131 8.029999999999999e-37   NR CQB87556.1 813 g46833 i0 79.8 1 84 13 100 1 1 252 50 129 CQB87556.1 site-specific tyrosine recombinase XerC [Chlamydia trachomatis] diamond 252 131 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia trachomatis
15226920 15226920 PRJNA743294_P_NODE_60192_length_214_cov_4.652482_g59736_i0 PRJNA743294 60192 214 4.652482 9.95631148 Bacteria 2 Bacteria Bacteria 97.4 3.2000000000000003e-23   NR PIS02497.1 1973936 g59736 i0 61.2 17.0046728971963 67 26 93.9 0 212 12 141 207 PIS02497.1 MAG: superoxide dismutase [Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_42_34] diamond 3639 98.2 0.991853360488798 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_42_34
16501276 16501276 PRJNA743294_P_NODE_10653_length_485_cov_4.766990_g10197_i0 PRJNA743294 10653 485 4.76699 23.1199015 Chlamydiales bacterium 2047757 Bacteria Bacteria 217 1.9e-69   NR MCP5470420.1 2047757 g10197 i0 81 0.909278350515464 147 26 90.9 1 1 441 2 146 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 441 217 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
22399579 22399579 PRJNA743294_P_NODE_42878_length_261_cov_1.521277_g42422_i0 PRJNA743294 42878 261 1.521277 3.97053297 Candidatus Protochlamydia phocaeensis 1414722 Bacteria Bacteria 139 5.589999999999999e-37   NR WP_068467153.1 1414722 g42422 i0 78.6 7.5632183908046 84 18 96.6 0 8 259 185 268 WP_068467153.1 asparagine--tRNA ligase [Candidatus Protochlamydia phocaeensis] diamond 1974 139 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Candidatus Protochlamydia Candidatus Protochlamydia phocaeensis
26926088 26926088 PRJNA743294_P_NODE_9882_length_502_cov_16.729604_g9426_i0 PRJNA743294 9882 502 16.729604 83.98261208 Chlamydiales bacterium 2047757 Bacteria Bacteria 261 5.129999999999999e-87   NR MCP5470421.1 2047757 g9426 i0 78.5 0.944223107569721 158 34 94.4 0 497 24 1 158 MCP5470421.1 hypothetical protein [Chlamydiales bacterium] diamond 474 261 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
26999224 26999224 PRJNA743294_P_NODE_14682_length_418_cov_2.852174_g14226_i0 PRJNA743294 14682 418 2.852174 11.92208732 Bacteria 2 Bacteria Bacteria 53.1 5.35e-5   NR OGN53086.1 1797595 g14226 i0 32.5 1.72248803827751 120 74 86.1 4 413 54 180 292 OGN53086.1 MAG: hypothetical protein A2Z85_02460 [Chlamydiae bacterium GWA2_50_15] diamond 720 53.1 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiae bacterium GWA2_50_15
27147012 27147012 PRJNA743294_P_NODE_8142_length_551_cov_1.577406_g7686_i0 PRJNA743294 8142 551 1.577406 8.69150706 Chlamydiales bacterium 2047757 Bacteria Bacteria 69.7 4.36e-12   NR MCP5470422.1 2047757 g7686 i0 69 0.228675136116152 42 13 22.9 0 453 328 15 56 MCP5470422.1 hypothetical protein [Chlamydiales bacterium] diamond 126 69.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
27337220 27337220 PRJNA743294_P_NODE_4843_length_692_cov_10.218094_g4413_i0 PRJNA743294 4843 692 10.218094 70.70921048 Candidatus Neptunochlamydia sp. REUL1 3064277 Bacteria Bacteria 96.7 9.33e-20   NR WP_316357043.1 3064277 g4413 i0 36 0.65028901734104 150 93 64.6 2 600 154 129 276 WP_316357043.1 ubiquitin-like protein [Candidatus Neptunochlamydia sp. REUL1] diamond 450 96.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Candidatus Neptunichlamydia Candidatus Neptunichlamydia sp. REUL1
27589889 27589889 PRJNA743294_P_NODE_40544_length_267_cov_1.675258_g40088_i0 PRJNA743294 40544 267 1.675258 4.47293886 Chlamydiales bacterium 2047757 Bacteria Bacteria 47.4 0.0011   NR MBN9378999.1 2047757 g40088 i0 32.6 1.71910112359551 86 54 96.6 2 10 267 150 231 MBN9378999.1 hypothetical protein [Chlamydiales bacterium] diamond 459 47.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
27905223 27905223 PRJNA743294_P_NODE_4645_length_705_cov_3.917722_g4225_i0 PRJNA743294 4645 705 3.917722 27.6199401 Simkania sp. 34094 Bacteria Bacteria 177 1.51e-53   NR MCB1084366.1 34094 g4225 i0 93.1 0.429787234042553 101 7 43 0 355 657 1 101 MCB1084366.1 hypothetical protein [Simkania sp.] diamond 303 177 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
28221075 28221075 PRJNA743294_P_NODE_8506_length_539_cov_3.699571_g8050_i0 PRJNA743294 8506 539 3.699571 19.94068769 Simkania sp. 34094 Bacteria Bacteria 95.1 1.14e-20   NR MCB1084431.1 34094 g8050 i0 42.1 0.846011131725417 152 78 82.9 2 3 449 38 182 MCB1084431.1 hypothetical protein [Simkania sp.] diamond 456 95.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
28979098 28979098 PRJNA743294_P_NODE_13488_length_435_cov_1.933702_g13032_i0 PRJNA743294 13488 435 1.933702 8.4116037 Candidatus Amphrikana amoebophyrae 3076870 Bacteria Bacteria 86.3 5.59e-17   NR MDN3504659.1 3076870 g13032 i0 38.1 0.924137931034483 134 80 92.4 3 405 4 52 182 MDN3504659.1 glycosyltransferase family A protein [Candidatus Amphrikana amoebophyrae] diamond 402 86.3 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Candidatus Amphrikana Candidatus Amphrikana amoebophyrae
29010918 29010918 PRJNA743294_P_NODE_18568_length_375_cov_2.288079_g18112_i0 PRJNA743294 18568 375 2.288079 8.58029625 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 49.7 5.47e-4   NR HSX04649.1 2047756 g18112 i0 36.5 0.848 52 33 41.6 0 357 202 274 325 HSX04649.1 glycosyl transferase family 90 [Rhabdochlamydiaceae bacterium] diamond 318 49.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
29547134 29547134 PRJNA743294_P_NODE_28510_length_311_cov_1.042017_g28054_i0 PRJNA743294 28510 311 1.042017 3.24067287 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 60.5 4.42e-8   NR MBX9924639.1 2047756 g28054 i0 37.6 0.819935691318328 85 51 82 1 3 257 212 294 MBX9924639.1 hypothetical protein [Rhabdochlamydiaceae bacterium] diamond 255 60.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
29620069 29620069 PRJNA743294_P_NODE_23030_length_341_cov_1.735075_g22574_i0 PRJNA743294 23030 341 1.735075 5.91660575 Candidatus Sacchlamyda 3076871 Bacteria Bacteria 63.2 7.79e-9   NR NGX39370.1 2081524 g22574 i0 44.8 1.97947214076246 67 34 58.9 2 132 332 34 97 NGX39370.1 putative glycosyltransferase EpsE [Chlamydiota bacterium] diamond 675 63.2 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
29641717 29641717 PRJNA743294_P_NODE_35450_length_283_cov_1.485714_g34994_i0 PRJNA743294 35450 283 1.485714 4.20457062 Candidatus Protochlamydia phocaeensis 1414722 Bacteria Bacteria 79 1.1e-14   NR WP_068469007.1 1414722 g34994 i0 71.7 0.975265017667845 46 13 48.8 0 282 145 489 534 WP_068469007.1 ADP-ribosylhydrolase MavL family protein [Candidatus Protochlamydia phocaeensis] diamond 276 79 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Candidatus Protochlamydia Candidatus Protochlamydia phocaeensis
30379020 30379020 PRJNA743294_P_NODE_33492_length_290_cov_1.078341_g33036_i0 PRJNA743294 33492 290 1.078341 3.1271889 Pseudomonadati 3379134 Bacteria Bacteria 148 2.1499999999999993e-40   NR OJV11681.1 1895743 g33036 i0 68.1 26.2862068965517 94 29 97.2 1 283 2 168 260 OJV11681.1 MAG: 7-dehydrocholesterol reductase [Chlamydiales bacterium 38-26] diamond 7623 149 0.993288590604027 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium 38-26
30747710 30747710 PRJNA743294_P_NODE_10774_length_482_cov_15.044010_g10318_i0 PRJNA743294 10774 482 15.04401 72.5121282 Chlamydiales bacterium 2047757 Bacteria Bacteria 162 1.0099999999999999e-47   NR MCP5470420.1 2047757 g10318 i0 62.8 0.921161825726141 148 53 92.1 1 476 33 1 146 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 444 162 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
30810910 30810910 PRJNA743294_P_NODE_17274_length_388_cov_1.241270_g16818_i0 PRJNA743294 17274 388 1.24127 4.8161276 Chlamydiota bacterium 2081524 Bacteria Bacteria 71.2 1.19e-11   NR MBM3194544.1 2081524 g16818 i0 30.2 1.99484536082474 129 61 99 2 2 385 90 190 MBM3194544.1 hypothetical protein [Chlamydiota bacterium] diamond 774 71.2 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
31189663 31189663 PRJNA743294_P_NODE_24675_length_331_cov_2.073643_g24219_i0 PRJNA743294 24675 331 2.073643 6.86375833 Chlamydiota bacterium 2081524 Bacteria Bacteria 107 2.24e-24   NR NGX45594.1 2081524 g24219 i0 64.1 0.706948640483384 78 28 70.7 0 240 7 430 507 NGX45594.1 ADP-ribosyl-[dinitrogen reductase] glycohydrolase [Chlamydiota bacterium] diamond 234 107 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
31474811 31474811 PRJNA743294_P_NODE_2356_length_958_cov_6.332203_g2033_i0 PRJNA743294 2356 958 6.332203 60.66250474 Simkania sp. 34094 Bacteria Bacteria 257 1.3699999999999999e-81   NR MCB1084310.1 34094 g2033 i0 75.6 0.526096033402923 168 41 52.6 0 693 190 1 168 MCB1084310.1 hypothetical protein [Simkania sp.] diamond 504 257 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
31506497 31506497 PRJNA743294_P_NODE_11696_length_464_cov_3.051151_g11240_i0 PRJNA743294 11696 464 3.051151 14.15734064 Parachlamydia sp. 2052048 Bacteria Bacteria 64.7 6.66e-9   NR MCE5316814.1 2052048 g11240 i0 54.1 0.394396551724138 61 22 39.4 1 448 266 294 348 MCE5316814.1 type III polyketide synthase [Parachlamydia sp.] diamond 183 64.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Parachlamydia Parachlamydia sp.
31569819 31569819 PRJNA743294_P_NODE_31236_length_298_cov_2.600000_g30780_i0 PRJNA743294 31236 298 2.6 7.748 Neochlamydia sp. S13 1353976 Bacteria Bacteria 45.1 0.0108   NR WP_130589636.1 1353976 g30780 i0 58.5 0.412751677852349 41 15 39.3 1 233 117 161 201 WP_130589636.1 leucine-rich repeat domain-containing protein [Neochlamydia sp. S13] diamond 123 45.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Neochlamydia Neochlamydia sp. S13
31759313 31759313 PRJNA743294_P_NODE_26857_length_319_cov_1.573171_g26401_i0 PRJNA743294 26857 319 1.573171 5.01841549 Candidatus Amphrikana amoebophyrae 3076870 Bacteria Bacteria 55.5 2.65e-6   NR MDN3504659.1 3076870 g26401 i0 36.8 0.893416927899687 95 57 89.3 2 300 16 72 163 MDN3504659.1 glycosyltransferase family A protein [Candidatus Amphrikana amoebophyrae] diamond 285 55.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Candidatus Amphrikana Candidatus Amphrikana amoebophyrae
32139041 32139041 PRJNA743294_P_NODE_10418_length_490_cov_6.973621_g9962_i0 PRJNA743294 10418 490 6.973621 34.1707429 Chlamydiales bacterium 2047757 Bacteria Bacteria 263 1.5899999999999992e-87   NR MCP5470421.1 2047757 g9962 i0 80 0.948979591836735 155 31 94.9 0 4 468 1 155 MCP5470421.1 hypothetical protein [Chlamydiales bacterium] diamond 465 263 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;