RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA743294" and tax_phylum = "Candidatus Electryoneota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Electryoneota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA743294 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30779349 30779349 PRJNA743294_P_NODE_50994_length_248_cov_0.891429_g50538_i0 PRJNA743294 50994 248 0.891429 2.21074392 Candidatus Hatepunaea meridiana 3039650 Bacteria Bacteria 60.8 1.5e-8   NR MDP8238596.1 3039650 g50538 i0 42.4 1.36693548387097 59 33 71.4 1 2 178 48 105 MDP8238596.1 WD40 repeat domain-containing protein [Candidatus Hatepunaea meridiana] diamond 339 60.8 1 Bacteria FCB group Pseudomonadati Candidatus Electryoneota Candidatus Electryoneia Candidatus Hatepunaeales Candidatus Hatepunaeaceae Candidatus Hatepunaea Candidatus Hatepunaea meridiana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;