RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA743294" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA743294 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26735710 26735710 PRJNA743294_P_NODE_6041_length_629_cov_3.496403_g5591_i0 PRJNA743294 6041 629 3.496403 21.99237487 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 163 2.7199999999999994e-42   NR HWX21912.1 2838779 g5591 i0 46.6 1.04451510333863 219 99 98.7 7 622 2 475 687 HWX21912.1 HYR domain-containing protein [Candidatus Binatia bacterium] diamond 657 163 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
26989106 26989106 PRJNA743294_P_NODE_43222_length_260_cov_1.668449_g42766_i0 PRJNA743294 43222 260 1.668449 4.3379674 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 97.4 2.6200000000000003e-21   NR MBY0276389.1 2838779 g42766 i0 56.3 11.0192307692308 87 34 99.2 2 1 258 227 310 MBY0276389.1 hypothetical protein [Candidatus Binatia bacterium] diamond 2865 97.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
27684798 27684798 PRJNA743294_P_NODE_50504_length_248_cov_1.337143_g50048_i0 PRJNA743294 50504 248 1.337143 3.31611464 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 94.4 2.38e-20   NR MFI5394923.1 2838779 g50048 i0 57 2.87903225806452 79 33 95.6 1 12 248 324 401 MFI5394923.1 aldehyde dehydrogenase family protein [Candidatus Binatia bacterium] diamond 714 94.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;