RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA743294", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA743294 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29862996 29862996 PRJNA743294_P_NODE_13491_length_435_cov_1.812155_g13035_i0 PRJNA743294 13491 435 1.812155 7.88287425 Synergistales bacterium 2268201 Bacteria Bacteria 111 1.11e-26   NR GHV41060.1 2268201 g13035 i0 46.3 1.91724137931034 134 62 92.4 4 404 3 42 165 GHV41060.1 4-hydroxy-tetrahydrodipicolinate synthase [Synergistales bacterium] diamond 834 111 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium
31063882 31063882 PRJNA743294_P_NODE_17815_length_382_cov_3.239482_g17359_i0 PRJNA743294 17815 382 3.239482 12.37482124 Synergistaceae bacterium 2053624 Bacteria Bacteria 61.6 3.18e-8   NR MBR0168578.1 2053624 g17359 i0 40.7 1.35078534031414 86 48 66.8 2 120 374 120 203 MBR0168578.1 FkbM family methyltransferase [Synergistaceae bacterium] diamond 516 61.6 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;