RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA743294", tax_kingdom = "Orthornavirae" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA743294 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26926029 26926029 PRJNA743294_P_NODE_22402_length_345_cov_2.275735_g21946_i0 PRJNA743294 22402 345 2.275735 7.85128575 Tolivirales sp. 2809914 Viruses Viruses 162 3.4299999999999998e-46   NR WRQ65379.1 2809914 g21946 i0 69.6 1.97391304347826 112 34 97.4 0 340 5 40 151 WRQ65379.1 structural protein [Tolivirales sp.] diamond 681 162 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
30874061 30874061 PRJNA743294_P_NODE_29114_length_308_cov_1.327660_g28658_i0 PRJNA743294 29114 308 1.32766 4.0891928 Qianjiang tombus-like virus 388 3348078 Viruses Viruses 112 1.14e-26   NR XHA87248.1 3348078 g28658 i0 51.4 1.02272727272727 105 48 99.4 1 307 2 300 404 XHA87248.1 MAG: putative RNA-dependent RNA polymerase [Qianjiang tombus-like virus 388] diamond 315 112 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Qianjiang tombus-like virus 388

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;