RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA743294", tax_kingdom = "Nanobdellati" and tax_phylum = "Candidatus Altarchaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Altarchaeota · 2 ✖

tax_kingdom 1

  • Nanobdellati · 2 ✖

bioproject 1

  • PRJNA743294 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25424931 25424931 PRJNA743294_P_NODE_37120_length_277_cov_2.803922_g36664_i0 PRJNA743294 37120 277 2.803922 7.76686394 Candidatus Altarchaeum sp. 2817952 Archaea Archaea 60.1 4.03e-8   NR MDI6730268.1 2817952 g36664 i0 43.9 5.68592057761733 66 37 71.5 0 9 206 2 67 MDI6730268.1 molecular chaperone DnaJ [Candidatus Altarchaeum sp.] diamond 1575 60.1 1 Archaea   Nanobdellati Candidatus Altarchaeota Candidatus Altiarchaeia Candidatus Altarchaeales Candidatus Altarchaeaceae Candidatus Altarchaeum Candidatus Altarchaeum sp.
32392155 32392155 PRJNA743294_P_NODE_16179_length_400_cov_2.278287_g15723_i0 PRJNA743294 16179 400 2.278287 9.113148 Candidatus Altiarchaeota archaeon 2599821 Archaea Archaea 108 7.21e-25   NR MFH1721366.1 2599821 g15723 i0 42.1 1.9875 133 74 99 2 400 5 82 212 MFH1721366.1 DUF4139 domain-containing protein [Candidatus Altiarchaeota archaeon] diamond 795 108 1 Archaea   Nanobdellati Candidatus Altarchaeota         Candidatus Altiarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;