RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA743294", tax_kingdom = "Metazoa" and tax_phylum = "Orthonectida"

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tax_superkingdom 1

tax_phylum 1

  • Orthonectida · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA743294 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28695013 28695013 PRJNA743294_P_NODE_2327_length_962_cov_2.772778_g2006_i0 PRJNA743294 2327 962 2.772778 26.67412436 Intoshia linei 1819745 Orthonectida other_Eukaryota 99.4 5.74e-19   NR OAF65792.1 1819745 g2006 i0 29.9 0.835758835758836 268 164 78.6 11 166 921 422 681 OAF65792.1 hypothetical protein A3Q56_06489 [Intoshia linei] diamond 804 99.4 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei
29073919 29073919 PRJNA743294_P_NODE_53628_length_245_cov_0.906977_g53172_i0 PRJNA743294 53628 245 0.906977 2.22209365 Intoshia linei 1819745 Orthonectida other_Eukaryota 45.4 0.00279   NR OAF71356.1 1819745 g53172 i0 40 1.50612244897959 60 34 71 1 241 68 63 122 OAF71356.1 hypothetical protein A3Q56_00866, partial [Intoshia linei] diamond 369 45.4 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei
32896646 32896646 PRJNA743294_P_NODE_48500_length_250_cov_2.079096_g48044_i0 PRJNA743294 48500 250 2.079096 5.19774 Intoshia linei 1819745 Orthonectida other_Eukaryota 43.1 0.0292   NR OAF70820.1 1819745 g48044 i0 31.1 0.888 74 47 85.2 2 34 246 41 113 OAF70820.1 hypothetical protein A3Q56_01429 [Intoshia linei] diamond 222 43.1 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;