RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA743294", tax_clade = "PVC group" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 3 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 3 ✖

bioproject 1

  • PRJNA743294 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28631876 28631876 PRJNA743294_P_NODE_30687_length_301_cov_1.364035_g30231_i0 PRJNA743294 30687 301 1.364035 4.10574535 Pontiella sp. 2837462 Bacteria Bacteria 53.1 1.6e-5   NR WP_372809055.1 2837462 g30231 i0 40.4 1.77408637873754 89 37 88.7 2 1 267 221 293 WP_372809055.1 mucoidy inhibitor MuiA family protein, partial [Pontiella sp.] diamond 534 53.1 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Pontiellaceae Pontiella Pontiella sp.
30210368 30210368 PRJNA743294_P_NODE_39812_length_269_cov_2.168367_g39356_i0 PRJNA743294 39812 269 2.168367 5.83290723 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 82.4 4.21e-16   NR MFT7519905.1 2212473 g39356 i0 51.2 1.9182156133829 86 34 94.8 2 257 3 24 102 MFT7519905.1 short subunit dehydrogenase-like uncharacterized protein [Kiritimatiellia bacterium] diamond 516 82.4 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
30716039 30716039 PRJNA743294_P_NODE_53834_length_245_cov_0.901163_g53378_i0 PRJNA743294 53834 245 0.901163 2.20784935 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 48.9 1.64e-4   NR MBL7114307.1 2212473 g53378 i0 52.4 0.514285714285714 42 20 51.4 0 3 128 160 201 MBL7114307.1 ankyrin repeat domain-containing protein [Kiritimatiellia bacterium] diamond 126 48.9 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;