contig_metadata
15 rows where bioproject = "PRJNA743294", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 722093 | 722093 | PRJNA743294_P_NODE_42521_length_262_cov_1.386243_g42065_i0 | PRJNA743294 | 42521 | 262 | 1.386243 | 3.63195666 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 52.8 | 0.024 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g42065 | i0 | 100 | 0.106870229007634 | 28 | 0 | 11 | 0 | 231 | 258 | 621305 | 621332 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 1198337 | 1198337 | PRJNA743294_P_NODE_45821_length_253_cov_14.477778_g45365_i0 | PRJNA743294 | 45821 | 253 | 14.477778 | 36.62877834 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 115 | 3.95e-30 | NR | HEX3868160.1 | 2026741 | g45365 | i0 | 68.8 | 6.6403162055336 | 80 | 25 | 94.9 | 0 | 240 | 1 | 1 | 80 | HEX3868160.1 superoxide dismutase [Gemmatimonadaceae bacterium] | diamond | 1680 | 115 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 16024819 | 16024819 | PRJNA743294_P_NODE_59153_length_229_cov_2.461538_g58697_i0 | PRJNA743294 | 59153 | 229 | 2.461538 | 5.63692202 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 92 | 1.14e-20 | NR | HTO73517.1 | 2448054 | g58697 | i0 | 55.3 | 0.995633187772926 | 76 | 34 | 99.6 | 0 | 229 | 2 | 64 | 139 | HTO73517.1 SDR family NAD(P)-dependent oxidoreductase [Gemmatimonadales bacterium] | diamond | 228 | 92 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 26609191 | 26609191 | PRJNA743294_P_NODE_22741_length_343_cov_1.581481_g22285_i0 | PRJNA743294 | 22741 | 343 | 1.581481 | 5.42447983 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 75.5 | 3.6e-13 | NR | HEX3232558.1 | 2448054 | g22285 | i0 | 56.6 | 0.463556851311953 | 53 | 23 | 46.4 | 0 | 273 | 115 | 10 | 62 | HEX3232558.1 aspartate aminotransferase family protein [Gemmatimonadales bacterium] | diamond | 159 | 75.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 27115616 | 27115616 | PRJNA743294_P_NODE_51202_length_247_cov_2.114943_g50746_i0 | PRJNA743294 | 51202 | 247 | 2.114943 | 5.22390921 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 80.1 | 2.79e-15 | NR | HZI99703.1 | 2026741 | g50746 | i0 | 46.4 | 2.05263157894737 | 84 | 42 | 98.4 | 2 | 246 | 4 | 472 | 555 | HZI99703.1 response regulator [Gemmatimonadaceae bacterium] | diamond | 507 | 80.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 28231025 | 28231025 | PRJNA743294_P_NODE_7306_length_578_cov_5.063366_g6854_i0 | PRJNA743294 | 7306 | 578 | 5.063366 | 29.26625548 | Bacteria | 2 | Bacteria | Bacteria | 115 | 7.99e-26 | NR | MEA2763824.1 | 2026741 | g6854 | i0 | 57 | 9.29584775086505 | 93 | 38 | 48.3 | 1 | 4 | 282 | 611 | 701 | MEA2763824.1 beta-glucosidase [Gemmatimonadaceae bacterium] | diamond | 5373 | 116 | 0.991379310344828 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 28505320 | 28505320 | PRJNA743294_P_NODE_27687_length_315_cov_0.966942_g27231_i0 | PRJNA743294 | 27687 | 315 | 0.966942 | 3.0458673 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 52 | 4.75e-5 | NR | TFG52714.1 | 2448054 | g27231 | i0 | 44.8 | 0.552380952380952 | 58 | 32 | 55.2 | 0 | 179 | 6 | 465 | 522 | TFG52714.1 MAG: hypothetical protein E4H37_05180 [Gemmatimonadales bacterium] | diamond | 174 | 52 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 28884150 | 28884150 | PRJNA743294_P_NODE_17288_length_388_cov_0.939683_g16832_i0 | PRJNA743294 | 17288 | 388 | 0.939683 | 3.64597004 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 43.5 | 0.0402 | NR | MDP1858387.1 | 2026741 | g16832 | i0 | 41.2 | 0.525773195876289 | 68 | 38 | 52.6 | 1 | 48 | 251 | 2 | 67 | MDP1858387.1 hypothetical protein [Gemmatimonadaceae bacterium] | diamond | 204 | 43.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 29262956 | 29262956 | PRJNA743294_P_NODE_48949_length_250_cov_0.881356_g48493_i0 | PRJNA743294 | 48949 | 250 | 0.881356 | 2.20339 | Candidatus Palauibacterales bacterium | 2994973 | Bacteria | Bacteria | 45.8 | 0.00316 | NR | MDP2469681.1 | 2994973 | g48493 | i0 | 32.5 | 0.96 | 80 | 50 | 96 | 1 | 249 | 10 | 43 | 118 | MDP2469681.1 hypothetical protein [Candidatus Palauibacterales bacterium] | diamond | 240 | 45.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Candidatus Palauibacterales | Candidatus Palauibacterales bacterium | |||
| 30147128 | 30147128 | PRJNA743294_P_NODE_48272_length_251_cov_0.876404_g47816_i0 | PRJNA743294 | 48272 | 251 | 0.876404 | 2.19977404 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 52.4 | 1.28e-5 | NR | MBL0171369.1 | 2026741 | g47816 | i0 | 44.1 | 0.812749003984064 | 68 | 38 | 81.3 | 0 | 207 | 4 | 99 | 166 | MBL0171369.1 4'-phosphopantetheinyl transferase superfamily protein [Gemmatimonadaceae bacterium] | diamond | 204 | 52.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 30210367 | 30210367 | PRJNA743294_P_NODE_39292_length_271_cov_1.212121_g38836_i0 | PRJNA743294 | 39292 | 271 | 1.212121 | 3.28484791 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 44.3 | 0.0107 | NR | MCJ7629911.1 | 2910168 | g38836 | i0 | 50 | 0.44280442804428 | 40 | 20 | 44.3 | 0 | 1 | 120 | 14 | 53 | MCJ7629911.1 tetratricopeptide repeat protein [Longimicrobiales bacterium] | diamond | 120 | 44.3 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 30842602 | 30842602 | PRJNA743294_P_NODE_44574_length_257_cov_1.119565_g44118_i0 | PRJNA743294 | 44574 | 257 | 1.119565 | 2.87728205 | Longimicrobiaceae bacterium | 3047548 | Bacteria | Bacteria | 57.8 | 2.1e-7 | NR | HEX5724514.1 | 3047548 | g44118 | i0 | 42.9 | 0.817120622568093 | 70 | 37 | 78.2 | 2 | 247 | 47 | 180 | 249 | HEX5724514.1 serine/threonine-protein kinase [Longimicrobiaceae bacterium] | diamond | 210 | 57.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobiaceae bacterium | ||
| 30947537 | 30947537 | PRJNA743294_P_NODE_24154_length_334_cov_2.363985_g23698_i0 | PRJNA743294 | 24154 | 334 | 2.363985 | 7.8957099 | Bacteria | 2 | Bacteria | Bacteria | 138 | 2.87e-36 | NR | ODS99984.1 | 1660163 | g23698 | i0 | 47.7 | 4.98502994011976 | 111 | 58 | 99.7 | 0 | 2 | 334 | 80 | 190 | ODS99984.1 MAG: amine oxidase [Gemmatimonadetes bacterium SCN 70-22] | diamond | 1665 | 138 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadetes bacterium SCN 70-22 | |||||
| 31706161 | 31706161 | PRJNA743294_P_NODE_41337_length_265_cov_1.614583_g40881_i0 | PRJNA743294 | 41337 | 265 | 1.614583 | 4.27864495 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 125 | 5.359999999999999e-31 | NR | MBT7552826.1 | 2026742 | g40881 | i0 | 67.1 | 3.90566037735849 | 85 | 28 | 96.2 | 0 | 258 | 4 | 245 | 329 | MBT7552826.1 hypothetical protein [Gemmatimonadota bacterium] | diamond | 1035 | 125 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 32202335 | 32202335 | PRJNA743294_P_NODE_2598_length_915_cov_4.097387_g2266_i0 | PRJNA743294 | 2598 | 915 | 4.097387 | 37.49109105 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 122 | 8.93e-27 | NR | NIM49516.1 | 2448054 | g2266 | i0 | 43.2 | 0.99344262295082 | 148 | 80 | 47.5 | 2 | 915 | 481 | 550 | 696 | NIM49516.1 tandem-95 repeat protein [Gemmatimonadales bacterium] | diamond | 909 | 122 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;