RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA743294", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 8 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 8 ✖

bioproject 1

  • PRJNA743294 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9650544 9650544 PRJNA743294_P_NODE_39948_length_269_cov_1.474490_g39492_i0 PRJNA743294 39948 269 1.47449 3.9663781 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 398 2.7499999999999996e-106   NTclustered gi|2621786419|emb|OY782877.1| 2030809 g39492 i0 93.309 680.494423791822 269 18 100 0 1 269 2442646 2442914 MAG: Candidatus Hydrogenedentes bacterium isolate 28e603e2-5466-4732-bb1a-a7370d5bccbd genome assembly, chromosome: 1 blastn 183053 398 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
23674971 23674971 PRJNA743294_P_NODE_23659_length_337_cov_2.446970_g23203_i0 PRJNA743294 23659 337 2.44697 8.2462889 Candidatus Hydrogenedens 1462415 Bacteria Bacteria 197 6.45e-61   NR MBI2421393.1 2030809 g23203 i0 81.3 5.92878338278932 112 21 99.7 0 1 336 99 210 MBI2421393.1 SDR family oxidoreductase [Candidatus Hydrogenedentota bacterium] diamond 1998 197 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28704983 28704983 PRJNA743294_P_NODE_39527_length_270_cov_1.725888_g39071_i0 PRJNA743294 39527 270 1.725888 4.6598976 Bacteria 2 Bacteria Bacteria 67.8 7.64e-11   NR NLV46131.1 2030809 g39071 i0 41.7 3.03333333333333 72 42 80 0 216 1 244 315 NLV46131.1 metallophosphoesterase family protein [Candidatus Hydrogenedentota bacterium] diamond 819 67.8 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29620073 29620073 PRJNA743294_P_NODE_37570_length_276_cov_1.596059_g37114_i0 PRJNA743294 37570 276 1.596059 4.40512284 root 1 Root_unresolved Root_unresolved 70.9 5.31e-12   NR MCX5772622.1 2030809 g37114 i0 36.4 8.75 88 54 95.7 1 3 266 155 240 MCX5772622.1 pyridoxal-dependent decarboxylase [Candidatus Hydrogenedentota bacterium] diamond 2415 70.9 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
30210347 30210347 PRJNA743294_P_NODE_26272_length_322_cov_1.855422_g25816_i0 PRJNA743294 26272 322 1.855422 5.97445884 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 80.9 3.51e-15   NR MCH7958696.1 2030809 g25816 i0 40.6 2.93478260869565 106 58 98.8 2 3 320 327 427 MCH7958696.1 M20 family peptidase [Candidatus Hydrogenedentota bacterium] diamond 945 80.9 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
31632786 31632786 PRJNA743294_P_NODE_34816_length_285_cov_1.584906_g34360_i0 PRJNA743294 34816 285 1.584906 4.5169821 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 77 5.07e-14   NR MBP8129650.1 2030809 g34360 i0 44 1.91578947368421 91 43 95.8 2 281 9 292 374 MBP8129650.1 aldehyde dehydrogenase family protein [Candidatus Hydrogenedentota bacterium] diamond 546 77 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
31759348 31759348 PRJNA743294_P_NODE_53837_length_245_cov_0.901163_g53381_i0 PRJNA743294 53837 245 0.901163 2.20784935 Candidatus Hydrogenedentes bacterium CG 1974588 Bacteria Bacteria 85.5 2.74e-17   NR PIU47692.1 1974588 g53381 i0 58.4 2.84081632653061 77 31 94.3 1 3 233 340 415 PIU47692.1 MAG: aspartate aminotransferase family protein [Candidatus Hydrogenedentes bacterium CG07_land_8_20_14_0_80_42_17] diamond 696 85.5 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentes bacterium CG07_land_8_20_14_0_80_42_17
32707885 32707885 PRJNA743294_P_NODE_980_length_1335_cov_6.835975_g803_i0 PRJNA743294 980 1335 6.835975 91.26026625 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 356 4.1e-112   NR MCH7959314.1 2030809 g803 i0 49 1.88988764044944 431 180 92.6 12 1297 62 313 722 MCH7959314.1 SDR family NAD(P)-dependent oxidoreductase [Candidatus Hydrogenedentota bacterium] diamond 2523 356 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;