RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA743294", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA743294 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27810909 27810909 PRJNA743294_P_NODE_21604_length_351_cov_1.651079_g21148_i0 PRJNA743294 21604 351 1.651079 5.79528729 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 97.1 1.16e-20   NR MEA1971907.1 2030808 g21148 i0 52.9 3.78632478632479 102 44 87.2 1 349 44 292 389 MEA1971907.1 ATP-dependent zinc metalloprotease FtsH [Candidatus Cloacimonadota bacterium] diamond 1329 97.1 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
28631859 28631859 PRJNA743294_P_NODE_1367_length_1194_cov_2.611062_g1141_i0 PRJNA743294 1367 1194 2.611062 31.17608028 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 47.8 0.0181   NR MDD3052619.1 2030808 g1141 i0 23.4 0.42964824120603 171 121 42 6 553 1053 4 168 MDD3052619.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 513 47.8 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
32843753 32843753 PRJNA743294_P_NODE_6120_length_626_cov_2.737794_g5670_i0 PRJNA743294 6120 626 2.737794 17.13859044 Candidatus Cloacimonas 456826 Bacteria Bacteria 60.5 1.91e-8   NR MDD2251308.1 2030808 g5670 i0 42.2 2.3961661341853 64 34 29.2 2 253 71 8 71 MDD2251308.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 1500 60.5 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;