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contig_metadata

8 rows where bioproject = "PRJNA743294", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 8 ✖

tax_clade 1

  • Bacteria candidate phyla · 8 ✖

bioproject 1

  • PRJNA743294 · 8 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27400419 27400419 PRJNA743294_P_NODE_47583_length_251_cov_2.584270_g47127_i0 PRJNA743294 47583 251 2.58427 6.4865177 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 81.3 9.4e-16   NR NDK08896.1 2044595 g47127 i0 51.9 7.37450199203187 77 37 92 0 231 1 65 141 NDK08896.1 threonine ammonia-lyase IlvA [Candidatus Altimarinota bacterium] diamond 1851 81.3 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28631883 28631883 PRJNA743294_P_NODE_37647_length_276_cov_1.320197_g37191_i0 PRJNA743294 37647 276 1.320197 3.64374372 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 82.4 6.56e-18   NR MCT4617582.1 2044595 g37191 i0 43.4 0.902173913043478 83 47 90.2 0 251 3 37 119 MCT4617582.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 249 82.4 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28631910 28631910 PRJNA743294_P_NODE_53027_length_245_cov_2.395349_g52571_i0 PRJNA743294 53027 245 2.395349 5.86860505 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 42.7 0.0356   NR MDD3646581.1 2044595 g52571 i0 42.9 0.6 49 28 60 0 202 56 111 159 MDD3646581.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 147 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29389601 29389601 PRJNA743294_P_NODE_42029_length_263_cov_1.642105_g41573_i0 PRJNA743294 42029 263 1.642105 4.31873615 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 130 4.6799999999999996e-34   NR MCF7917976.1 2044595 g41573 i0 67.8 1.98479087452471 87 28 99.2 0 262 2 100 186 MCF7917976.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Candidatus Altimarinota bacterium] diamond 522 130 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30021220 30021220 PRJNA743294_P_NODE_54411_length_244_cov_0.912281_g53955_i0 PRJNA743294 54411 244 0.912281 2.22596564 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 53.9 4.11e-6   NR MCP4523361.1 2044595 g53955 i0 32.9 0.971311475409836 79 53 97.1 0 2 238 139 217 MCP4523361.1 ion transporter [Candidatus Altimarinota bacterium] diamond 237 53.9 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31231578 31231578 PRJNA743294_P_NODE_57735_length_236_cov_3.717791_g57279_i0 PRJNA743294 57735 236 3.717791 8.77398676 Bacteria 2 Bacteria Bacteria 59.7 1.96e-8   NR NJK50502.1 2044595 g57279 i0 45.9 1.76694915254237 74 35 94.1 2 234 13 156 224 NJK50502.1 pirin family protein [Candidatus Altimarinota bacterium] diamond 417 60.1 0.993344425956739 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32244374 32244374 PRJNA743294_P_NODE_39458_length_270_cov_2.324873_g39002_i0 PRJNA743294 39458 270 2.324873 6.2771571 root 1 Root_unresolved Root_unresolved 105 1.33e-25   NR MFA6521137.1 2044595 g39002 i0 51.1 3.91111111111111 88 43 97.8 0 270 7 92 179 MFA6521137.1 methyltransferase [Candidatus Altimarinota bacterium] diamond 1056 106 0.990566037735849 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32802264 32802264 PRJNA743294_P_NODE_60000_length_219_cov_4.075342_g59544_i0 PRJNA743294 60000 219 4.075342 8.92499898 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 57 1.51e-8   NR MCK5460378.1 2044595 g59544 i0 59.2 0.671232876712329 49 20 67.1 0 62 208 24 72 MCK5460378.1 HU family DNA-binding protein [Candidatus Altimarinota bacterium] diamond 147 57 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;