RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA741997" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA741997 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26989037 26989037 PRJNA741997_P_NODE_56982_length_284_cov_3.924171_g55862_i0 PRJNA741997 56982 284 3.924171 11.14464564 Acidianus sp. HS-5 2886040 Archaea Archaea 43.9 0.0235   NR WP_236752183.1 2886040 g55862 i0 31.3 1.26760563380282 64 43 67.6 1 89 280 209 271 WP_236752183.1 PQQ-binding-like beta-propeller repeat protein [Acidianus sp. HS-5] diamond 360 43.9 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Acidianus Acidianus sp. HS-5
28094844 28094844 PRJNA741997_P_NODE_62305_length_273_cov_0.835000_g61185_i0 PRJNA741997 62305 273 0.835 2.27955 Thermoproteota archaeon 2056631 Archaea Archaea 43.5 0.027   NR MCD6491401.1 2056631 g61185 i0 29.6 0.89010989010989 81 56 89 1 271 29 18 97 MCD6491401.1 actin family protein [Thermoproteota archaeon] diamond 243 43.5 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
30779277 30779277 PRJNA741997_P_NODE_74314_length_250_cov_0.870056_g73194_i0 PRJNA741997 74314 250 0.870056 2.17514 Sulfolobales archaeon 2268200 Archaea Archaea 43.9 0.00673   NR MCS7108361.1 2268200 g73194 i0 33.3 0.9 75 47 90 2 245 21 68 139 MCS7108361.1 DUF3782 domain-containing protein [Sulfolobales archaeon] diamond 225 43.9 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales     Sulfolobales archaeon
30915915 30915915 PRJNA741997_P_NODE_73634_length_250_cov_0.870056_g72514_i0 PRJNA741997 73634 250 0.870056 2.17514 Thermoproteati 1783275 Archaea Archaea 47 0.00126   NR MEW6044595.1 2056631 g72514 i0 44 2.472 50 28 60 0 241 92 221 270 MEW6044595.1 site-2 protease family protein [Thermoproteota archaeon] diamond 618 47.4 0.991561181434599 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
32012406 32012406 PRJNA741997_P_NODE_31818_length_387_cov_0.980892_g30698_i0 PRJNA741997 31818 387 0.980892 3.79605204 Pyrobaculum sp. 2004705 Archaea Archaea 79 1.1e-14   NR MFN7106172.1 2004705 g30698 i0 45.5 2.11627906976744 88 48 68.2 0 351 88 183 270 MFN7106172.1 deoxyhypusine synthase [Pyrobaculum sp.] diamond 819 79 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;