RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA741997", tax_phylum = "Preplasmiviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Preplasmiviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA741997 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7576118 7576118 PRJNA741997_P_NODE_906_length_2380_cov_174.607282_g756_i0 PRJNA741997 906 2380 174.607282 4155.6533116 root 1 Root_unresolved Root_unresolved 4396 0   NTclustered gi|2288721861|gb|OP218818.1| 10535 g756 i0 100 100.112605042017 2380 0 100 0 1 2380 4074 1695 Unidentified adenovirus strain CHOP Ad5 blastn 238268 4396 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
15226661 15226661 PRJNA741997_P_NODE_1032_length_2296_cov_181.993702_g756_i1 PRJNA741997 1032 2296 181.993702 4178.57539792 root 1 Root_unresolved Root_unresolved 3354 0   NTclustered gi|2288721861|gb|OP218818.1| 10535 g756 i1 100 100.071428571429 1816 0 100 0 481 2296 3510 1695 Unidentified adenovirus strain CHOP Ad5 blastn 229764 3354 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;