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contig_metadata

6 rows where bioproject = "PRJNA741997", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 6 ✖

tax_phylum 1

  • Nitrososphaerota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA741997 · 6 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27146898 27146898 PRJNA741997_P_NODE_45982_length_320_cov_1.076923_g44862_i0 PRJNA741997 45982 320 1.076923 3.4461536 Nitrososphaeria archaeon 2268198 Archaea Archaea 46.2 0.00127   NR HDD42498.1 2268198 g44862 i0 34.3 1.575 67 41 62.8 1 87 287 34 97 HDD42498.1 hypothetical protein [Nitrososphaeria archaeon] diamond 504 46.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria       Nitrososphaeria archaeon
28915495 28915495 PRJNA741997_P_NODE_82408_length_245_cov_0.895349_g81288_i0 PRJNA741997 82408 245 0.895349 2.19360505 Nitrososphaerota archaeon 2026795 Archaea Archaea 50.4 7.08e-5   NR MDG6898287.1 2026795 g81288 i0 38.4 0.893877551020408 73 44 88.2 1 21 236 71 143 MDG6898287.1 amino acid ABC transporter substrate-binding protein [Nitrososphaerota archaeon] diamond 219 50.4 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
29200063 29200063 PRJNA741997_P_NODE_13729_length_656_cov_1.274443_g12647_i0 PRJNA741997 13729 656 1.274443 8.36034608 Nitrosotalea sp. 2833567 Archaea Archaea 229 3.23e-70   NR MDC8451799.1 2833567 g12647 i0 53.8 4.9344512195122 208 91 93.8 2 654 40 69 274 MDC8451799.1 multicopper oxidase domain-containing protein [Nitrosotalea sp.] diamond 3237 229 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosotaleales Nitrosotaleaceae Nitrosotalea Nitrosotalea sp.
30599636 30599636 PRJNA741997_P_NODE_50833_length_302_cov_1.681223_g49713_i0 PRJNA741997 50833 302 1.681223 5.07729346 root 1 Root_unresolved Root_unresolved 57.8 3.09e-7   NR MER5176172.1 2109671 g49713 i0 34.1 2.51324503311258 82 54 81.5 0 36 281 194 275 MER5176172.1 SDR family oxidoreductase [Candidatus Nitrosocosmicus sp.] diamond 759 58.2 0.993127147766323 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus sp.
30937334 30937334 PRJNA741997_P_NODE_28154_length_415_cov_1.078947_g27034_i0 PRJNA741997 28154 415 1.078947 4.47763005 Nitrososphaerota archaeon 2026795 Archaea Archaea 73.6 2.9e-12   NR MDG7045045.1 2026795 g27034 i0 38 1.98072289156627 137 72 92.5 6 30 413 218 350 MDG7045045.1 hypothetical protein [Nitrososphaerota archaeon] diamond 822 73.6 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
31284780 31284780 PRJNA741997_P_NODE_89055_length_241_cov_0.916667_g87935_i0 PRJNA741997 89055 241 0.916667 2.20916747 Candidatus Nitrosarchaeum limnium 1007084 Archaea Archaea 88.6 1.33e-18   NR WP_010192734.1 1007084 g87935 i0 58.8 8.67634854771784 80 32 99.6 1 2 241 28 106 WP_010192734.1 aldo/keto reductase [Candidatus Nitrosarchaeum limnium] diamond 2091 88.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Candidatus Nitrosarchaeum limnium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;