RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA741997" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA741997 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1997545 1997545 PRJNA741997_P_NODE_51462_length_300_cov_1.352423_g50342_i0 PRJNA741997 51462 300 1.352423 4.057269 Virgaviridae sp. 2795451 Viruses Viruses 477 3.8899999999999985e-130   NTclustered gi|2798495991|gb|PP945375.1| 2795451 g50342 i0 95.333 8.98333333333333 300 14 100 0 1 300 1354 1653 Sclerotinia sclerotiorum virga-like virus 1 strain China-NX078 segment RNA1, complete sequence blastn 2695 477 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae   Virgaviridae sp.
22399164 22399164 PRJNA741997_P_NODE_80778_length_246_cov_0.890173_g79658_i0 PRJNA741997 80778 246 0.890173 2.18982558 Virgaviridae sp. 2795451 Viruses Viruses 399 6.889999999999999e-107   NTclustered gi|2798495991|gb|PP945375.1| 2795451 g79658 i0 95.935 21.9878048780488 246 10 100 0 1 246 1104 859 Sclerotinia sclerotiorum virga-like virus 1 strain China-NX078 segment RNA1, complete sequence blastn 5409 399 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae   Virgaviridae sp.
23674714 23674714 PRJNA741997_P_NODE_83679_length_244_cov_1.456140_g82559_i0 PRJNA741997 83679 244 1.45614 3.5529816 Ripothoz virus 3131336 Viruses Viruses 182 2.689999999999999e-41   NTclustered gi|2717322249|gb|PP173638.1| 3131336 g82559 i0 81.579 0.934426229508197 228 34 91 7 3 224 5046 5271 MAG: Ripothoz virus isolate MP3_k141_314104 genomic sequence blastn 228 182 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales     Ripothoz virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;