RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA741997" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA741997 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28189336 28189336 PRJNA741997_P_NODE_79706_length_247_cov_0.885057_g78586_i0 PRJNA741997 79706 247 0.885057 2.18609079 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 92.4 1.25e-19   NR MBF0569577.1 2035772 g78586 i0 65.6 2.33198380566802 64 22 77.7 0 245 54 629 692 MBF0569577.1 phosphoenolpyruvate carboxykinase (ATP) [Candidatus Omnitrophota bacterium] diamond 576 92.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29073830 29073830 PRJNA741997_P_NODE_71848_length_251_cov_0.865169_g70728_i0 PRJNA741997 71848 251 0.865169 2.17157419 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 41.2 0.0216   NR MCA9414572.1 2035772 g70728 i0 38.3 0.561752988047809 47 29 56.2 0 50 190 8 54 MCA9414572.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 141 41.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30757833 30757833 PRJNA741997_P_NODE_76134_length_249_cov_0.875000_g75014_i0 PRJNA741997 76134 249 0.875 2.17875 Bacteria 2 Bacteria Bacteria 49.3 1.94e-4   NR HOW42448.1 2035772 g75014 i0 41.5 1.66265060240964 65 37 78.3 1 218 24 443 506 HOW42448.1 ATP-binding protein [Candidatus Omnitrophota bacterium] diamond 414 49.7 0.991951710261569 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30905758 30905758 PRJNA741997_P_NODE_53174_length_294_cov_1.936652_g52054_i0 PRJNA741997 53174 294 1.936652 5.69375688 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 89.4 1.11e-19   NR MCK5306904.1 2035772 g52054 i0 52.3 2.63265306122449 88 41 88.8 1 293 33 15 102 MCK5306904.1 translation elongation factor Ts [Candidatus Omnitrophota bacterium] diamond 774 89.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31063845 31063845 PRJNA741997_P_NODE_63875_length_269_cov_1.270408_g62755_i0 PRJNA741997 63875 269 1.270408 3.41739752 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 47.8 8.52e-4   NR NUN94855.1 2035772 g62755 i0 35.7 0.780669144981413 70 43 78.1 1 24 233 248 315 NUN94855.1 family 43 glycosylhydrolase [Candidatus Omnitrophota bacterium] diamond 210 47.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;