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contig_metadata

32 rows where bioproject = "PRJNA741997", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 32 ✖

tax_kingdom 1

  • Pseudomonadati · 32 ✖

bioproject 1

  • PRJNA741997 · 32 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1198160 1198160 PRJNA741997_P_NODE_85161_length_244_cov_0.888889_g84041_i0 PRJNA741997 85161 244 0.888889 2.16888916 Nitratidesulfovibrio 2802295 Bacteria Bacteria 300 7.12e-77   NTclustered gi|470474459|ref|NR_076217.1| 881 g84041 i0 89.069 180.549180327869 247 20 100 6 1 244 1390 1148 Desulfovibrio vulgaris strain Hildenborough 23S ribosomal RNA gene, complete sequence blastn 44054 300 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Nitratidesulfovibrio Nitratidesulfovibrio vulgaris
4549878 4549878 PRJNA741997_P_NODE_24964_length_447_cov_1.307487_g23844_i0 PRJNA741997 24964 447 1.307487 5.84446689 Desulfovibrionaceae bacterium 2049043 Bacteria Bacteria 54.7 0.012   NTclustered gi|2621705002|emb|OY762289.1| 2049043 g23844 i0 100 0.0648769574944072 29 0 6 0 224 252 185351 185379 MAG: Desulfovibrionaceae bacterium isolate 1e2121d5-5174-4668-bae3-9852897706ae genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae   Desulfovibrionaceae bacterium
5026413 5026413 PRJNA741997_P_NODE_76864_length_248_cov_1.320000_g75744_i0 PRJNA741997 76864 248 1.32 3.2736 Desulfobacteraceae bacterium IS3 1934248 Bacteria Bacteria 89 5.86e-19   NR OQX11418.1 1934248 g75744 i0 62.3 1.86290322580645 77 28 93.1 1 231 1 2 77 OQX11418.1 MAG: hypothetical protein BWK80_44715, partial [Desulfobacteraceae bacterium IS3] diamond 462 89 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium IS3
5824893 5824893 PRJNA741997_P_NODE_14425_length_635_cov_2.003559_g13334_i0 PRJNA741997 14425 635 2.003559 12.72259965 Candidatus Desulfatibia vada 2841696 Bacteria Bacteria 291 4.6799999999999997e-94   NR MBC8434257.1 2841696 g13334 i0 64.9 9.96377952755905 211 74 99.7 0 633 1 212 422 MBC8434257.1 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Candidatus Desulfatibia vada] diamond 6327 291 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales   Candidatus Desulfatibia Candidatus Desulfatibia vada
14750514 14750514 PRJNA741997_P_NODE_61912_length_273_cov_2.170000_g60792_i0 PRJNA741997 61912 273 2.17 5.9241 Pseudomonadati 3379134 Bacteria Bacteria 65.1 7.63e-10   NR MFA6823563.1 46610 g60792 i0 40.4 4.89010989010989 89 53 97.8 0 267 1 593 681 MFA6823563.1 putative Ig domain-containing protein [Geobacter sp.] diamond 1335 65.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Geobacter Geobacter sp.
18573221 18573221 PRJNA741997_P_NODE_48895_length_309_cov_1.432203_g47775_i0 PRJNA741997 48895 309 1.432203 4.42550727 Pseudomonadati 3379134 Bacteria Bacteria 84.7 1.5e-16   NR MCU0559980.1 2044940 g47775 i0 42.2 4.95145631067961 102 54 99 2 4 309 21 117 MCU0559980.1 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein [Desulfobacterales bacterium] diamond 1530 84.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
24948014 24948014 PRJNA741997_P_NODE_56460_length_286_cov_1.084507_g55340_i0 PRJNA741997 56460 286 1.084507 3.10169002 Desulfarculus baarsii 453230 Bacteria Bacteria 228 4.0899999999999984e-55   NTclustered gi|301638057|gb|CP002085.1| 644282 g55340 i0 82.745 41.8461538461538 255 44 89 0 32 286 903190 903444 Desulfarculus baarsii DSM 2075, complete genome blastn 11968 228 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfarculia Desulfarculales Desulfarculaceae Desulfarculus Desulfarculus baarsii
26735583 26735583 PRJNA741997_P_NODE_36241_length_361_cov_1.069444_g35121_i0 PRJNA741997 36241 361 1.069444 3.86069284 Desulfobacterales bacterium 2044940 Bacteria Bacteria 44.3 0.041   NR MCP4351509.1 2044940 g35121 i0 44.7 0.390581717451524 47 25 39.1 1 186 46 503 548 MCP4351509.1 hypothetical protein [Desulfobacterales bacterium] diamond 141 44.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
27052641 27052641 PRJNA741997_P_NODE_71602_length_251_cov_0.865169_g70482_i0 PRJNA741997 71602 251 0.865169 2.17157419 Syntrophales bacterium 2928017 Bacteria Bacteria 104 8.92e-25   NR MCX7817268.1 2928017 g70482 i0 63.3 1.9003984063745 79 27 92 1 237 7 3 81 MCX7817268.1 DnaJ domain-containing protein [Syntrophales bacterium] diamond 477 104 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales     Syntrophales bacterium
27273817 27273817 PRJNA741997_P_NODE_42503_length_333_cov_1.530769_g41383_i0 PRJNA741997 42503 333 1.530769 5.09746077 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 131 5.69e-33   NR MDY6904133.1 2202153 g41383 i0 57.3 3.81081081081081 103 44 92.8 0 2 310 563 665 MDY6904133.1 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein [Thermodesulfobacteriota bacterium] diamond 1269 131 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
27747712 27747712 PRJNA741997_P_NODE_37384_length_355_cov_1.507092_g36264_i0 PRJNA741997 37384 355 1.507092 5.3501766 Oceanidesulfovibrio indonesiensis 54767 Bacteria Bacteria 44.7 0.0222   NR WP_144304087.1 54767 g36264 i0 30 0.845070422535211 100 55 72.7 3 8 265 64 162 WP_144304087.1 class I fructose-bisphosphate aldolase [Oceanidesulfovibrio indonesiensis] diamond 300 44.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Oceanidesulfovibrio Oceanidesulfovibrio indonesiensis
27852262 27852262 PRJNA741997_P_NODE_74524_length_250_cov_0.870056_g73404_i0 PRJNA741997 74524 250 0.870056 2.17514 Pseudomonadati 3379134 Bacteria Bacteria 130 2.44e-36   NR WP_319586763.1 239745 g73404 i0 79.3 1.968 82 17 98.4 0 248 3 12 93 WP_319586763.1 hypothetical protein [uncultured Desulfobulbus sp.] diamond 492 130 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae Desulfobulbus uncultured Desulfobulbus sp.
27937062 27937062 PRJNA741997_P_NODE_46665_length_317_cov_1.495902_g45545_i0 PRJNA741997 46665 317 1.495902 4.74200934 uncultured Desulfuromusa sp. 219183 Bacteria Bacteria 51.2 8.93e-5   NR WP_321391052.1 219183 g45545 i0 36.4 0.728706624605678 77 48 72.9 1 274 44 318 393 WP_321391052.1 PEP-CTERM-box response regulator transcription factor [uncultured Desulfuromusa sp.] diamond 231 51.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Geopsychrobacteraceae Desulfuromusa uncultured Desulfuromusa sp.
28252615 28252615 PRJNA741997_P_NODE_38666_length_349_cov_1.286232_g37546_i0 PRJNA741997 38666 349 1.286232 4.48894968 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 57 5.66e-7   NR GJM17643.1 2202153 g37546 i0 34.2 0.679083094555874 79 51 67 1 8 241 134 212 GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium] diamond 237 57 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
28547243 28547243 PRJNA741997_P_NODE_79467_length_247_cov_0.885057_g78347_i0 PRJNA741997 79467 247 0.885057 2.18609079 Pseudomonadati 3379134 Bacteria Bacteria 85.5 5.74e-18   NR OGR15419.1 1797910 g78347 i0 51.9 4.91902834008097 81 39 98.4 0 2 244 119 199 OGR15419.1 MAG: hypothetical protein A2097_07540 [Desulfobacula sp. GWF2_41_7] diamond 1215 85.9 0.9953434225844 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae Desulfobacula Desulfobacula sp. GWF2_41_7
28726344 28726344 PRJNA741997_P_NODE_59127_length_280_cov_1.115942_g58007_i0 PRJNA741997 59127 280 1.115942 3.1246376 Pseudodesulfovibrio karagichevae 3239305 Bacteria Bacteria 53.5 9.33e-6   NR WP_371385246.1 3239305 g58007 i0 37.3 1.44642857142857 67 42 71.8 0 5 205 177 243 WP_371385246.1 ankyrin repeat domain-containing protein [Pseudodesulfovibrio karagichevae] diamond 405 53.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Pseudodesulfovibrio Pseudodesulfovibrio karagichevae
29137030 29137030 PRJNA741997_P_NODE_30389_length_397_cov_1.453704_g29269_i0 PRJNA741997 30389 397 1.453704 5.77120488 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 54.7 6.42e-6   NR GJM17643.1 2202153 g29269 i0 39.2 0.596977329974811 79 47 58.9 1 85 318 134 212 GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium] diamond 237 54.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
29262854 29262854 PRJNA741997_P_NODE_43709_length_328_cov_1.807843_g42589_i0 PRJNA741997 43709 328 1.807843 5.92972504 Desulfoglaeba alkanexedens ALDC 980445 Bacteria Bacteria 43.5 0.0478   NR QCQ22209.1 980445 g42589 i0 39.8 0.850609756097561 93 39 80.5 5 6 269 4 84 QCQ22209.1 ABC transporter ATP-binding protein [Desulfoglaeba alkanexedens ALDC] diamond 279 43.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophobacteria Syntrophobacterales Syntrophobacteraceae Desulfoglaeba Desulfoglaeba alkanexedens
29588601 29588601 PRJNA741997_P_NODE_20890_length_499_cov_1.779343_g19773_i0 PRJNA741997 20890 499 1.779343 8.87892157 Bacteria 2 Bacteria Bacteria 109 3.81e-27   NR MCA9809760.1 2080303 g19773 i0 42.2 9.37875751503006 135 74 80 2 478 80 2 134 MCA9809760.1 Hsp20/alpha crystallin family protein [Candidatus Dadabacteria bacterium] diamond 4680 109 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
29831351 29831351 PRJNA741997_P_NODE_1591_length_2001_cov_1.854253_g1357_i0 PRJNA741997 1591 2001 1.854253 37.10360253 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 53.9 5.22e-4   NR GJM17643.1 2202153 g1357 i0 25.6 0.328335832083958 219 140 31.6 7 977 345 10 213 GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium] diamond 657 53.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
29862965 29862965 PRJNA741997_P_NODE_7351_length_987_cov_1.583151_g6518_i0 PRJNA741997 7351 987 1.583151 15.62570037 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 51.2 0.00157   NR GJM17643.1 2202153 g6518 i0 33.8 0.206686930091185 68 44 20.4 1 11 211 145 212 GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium] diamond 204 51.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
29904831 29904831 PRJNA741997_P_NODE_67211_length_261_cov_1.558511_g66091_i0 PRJNA741997 67211 261 1.558511 4.06771371 Pseudomonadati 3379134 Bacteria Bacteria 55.5 1.03e-6   NR WP_288957164.1 167968 g66091 i0 37.2 3.95402298850575 86 53 98.9 1 259 2 83 167 WP_288957164.1 DUF4435 domain-containing protein [uncultured Desulfovibrio sp.] diamond 1032 55.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio uncultured Desulfovibrio sp.
30368925 30368925 PRJNA741997_P_NODE_37252_length_356_cov_1.024735_g36132_i0 PRJNA741997 37252 356 1.024735 3.6480566 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 50.4 1.54e-4   NR GJM17643.1 2202153 g36132 i0 38.3 0.50561797752809 60 36 49.7 1 182 6 133 192 GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium] diamond 180 50.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
30557893 30557893 PRJNA741997_P_NODE_82353_length_245_cov_0.895349_g81233_i0 PRJNA741997 82353 245 0.895349 2.19360505 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 106 1.16e-24   NR HEX9667675.1 2202153 g81233 i0 64.2 6.94285714285714 81 28 99.2 1 244 2 30 109 HEX9667675.1 molecular chaperone HtpG [Thermodesulfobacteriota bacterium] diamond 1701 106 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
30684298 30684298 PRJNA741997_P_NODE_38173_length_351_cov_1.834532_g37053_i0 PRJNA741997 38173 351 1.834532 6.43920732 Desulfuromonadales bacterium 2099678 Bacteria Bacteria 53.1 2.43e-5   NR NIQ98252.1 2099678 g37053 i0 29.7 2.23076923076923 91 58 72.6 1 80 334 130 220 NIQ98252.1 hypothetical protein [Desulfuromonadales bacterium] diamond 783 53.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales     Desulfuromonadales bacterium
31000472 31000472 PRJNA741997_P_NODE_22594_length_475_cov_1.186567_g21476_i0 PRJNA741997 22594 475 1.186567 5.63619325 Desulfobacterales bacterium 2044940 Bacteria Bacteria 82.8 3.82e-15   NR MBT9438311.1 2044940 g21476 i0 51.2 0.530526315789474 84 36 52.4 3 3 251 352 431 MBT9438311.1 hypothetical protein [Desulfobacterales bacterium] diamond 252 82.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
31189592 31189592 PRJNA741997_P_NODE_42115_length_335_cov_1.061069_g40995_i0 PRJNA741997 42115 335 1.061069 3.55458115 Smithellaceae bacterium 2964540 Bacteria Bacteria 55.5 2.29e-6   NR HLZ19882.1 2964540 g40995 i0 53.1 0.438805970149254 49 23 43.9 0 28 174 116 164 HLZ19882.1 SdrD B-like domain-containing protein [Smithellaceae bacterium] diamond 147 55.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Smithellaceae   Smithellaceae bacterium
31253199 31253199 PRJNA741997_P_NODE_39915_length_343_cov_2.025926_g38795_i0 PRJNA741997 39915 343 2.025926 6.94892618 Candidatus Adiutricales bacterium 3107020 Bacteria Bacteria 53.5 1.42e-5   NR MEE9557121.1 3107020 g38795 i0 47.2 2.25655976676385 53 28 46.4 0 319 161 2 54 MEE9557121.1 enoyl-CoA hydratase/isomerase family protein [Candidatus Adiutricales bacterium] diamond 774 53.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfarculia Candidatus Adiutricales     Candidatus Adiutricales bacterium
31506487 31506487 PRJNA741997_P_NODE_85556_length_243_cov_1.229412_g84436_i0 PRJNA741997 85556 243 1.229412 2.98747116 Candidatus Desulfatibia sp. 3101189 Bacteria Bacteria 47 0.00118   NR WP_413886072.1 3101189 g84436 i0 36.8 0.938271604938272 76 47 92.6 1 230 6 681 756 WP_413886072.1 response regulator [Candidatus Desulfatibia sp.] diamond 228 47 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales   Candidatus Desulfatibia Candidatus Desulfatibia sp.
31917446 31917446 PRJNA741997_P_NODE_32077_length_385_cov_1.349359_g30957_i0 PRJNA741997 32077 385 1.349359 5.19503215 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 61.6 4.35e-8   NR MFC1834884.1 2202153 g30957 i0 31.1 0.825974025974026 106 65 81.8 3 52 366 30 128 MFC1834884.1 hypothetical protein [Thermodesulfobacteriota bacterium] diamond 318 61.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
32044051 32044051 PRJNA741997_P_NODE_68318_length_259_cov_1.005376_g67198_i0 PRJNA741997 68318 259 1.005376 2.60392384 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 43.5 0.0216   NR MFC1799255.1 2202153 g67198 i0 41.8 0.637065637065637 55 30 62.5 2 29 190 61 114 MFC1799255.1 succinate dehydrogenase/fumarate reductase iron-sulfur subunit [Thermodesulfobacteriota bacterium] diamond 165 43.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
32234190 32234190 PRJNA741997_P_NODE_86258_length_243_cov_0.905882_g85138_i0 PRJNA741997 86258 243 0.905882 2.20129326 Candidatus Magnetoglobus multicellularis str. Araruama 890399 Bacteria Bacteria 70.9 8.56e-14   NR ETR65679.1 890399 g85138 i0 58.1 0.765432098765432 62 24 74.1 2 3 182 36 97 ETR65679.1 MAG: hypothetical protein OMM_13877, partial [Candidatus Magnetoglobus multicellularis str. Araruama] diamond 186 70.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae Candidatus Magnetoglobus Candidatus Magnetoglobus multicellularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;