RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA741997", tax_kingdom = "Pararnavirae" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA741997 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2473520 2473520 PRJNA741997_P_NODE_33002_length_379_cov_1.307190_g31882_i0 PRJNA741997 33002 379 1.30719 4.9542501 root 1 Root_unresolved Root_unresolved 701 0   NTclustered gi|2571213411|gb|OR467899.1| 10407 g31882 i0 100 99.9947229551451 379 0 100 0 1 379 1117 739 Hepatitis B virus isolate A polymerase (P) gene, complete cds blastn 37898 701 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Blubervirales Hepadnaviridae Orthohepadnavirus Orthohepadnavirus hominoidei
19049861 19049861 PRJNA741997_P_NODE_33275_length_377_cov_2.296053_g32155_i0 PRJNA741997 33275 377 2.296053 8.65611981 root 1 Root_unresolved Root_unresolved 697 0   NTclustered gi|429844000|gb|JX898697.1| 10407 g32155 i0 100 99.9893899204244 377 0 100 0 1 377 3034 2658 Hepatitis B virus isolate P32, complete genome blastn 37696 697 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Blubervirales Hepadnaviridae Orthohepadnavirus Orthohepadnavirus hominoidei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;