RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

11 rows where bioproject = "PRJNA741997", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 11 ✖

tax_kingdom 1

  • Fungi · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA741997 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3272800 3272800 PRJNA741997_P_NODE_40583_length_341_cov_1.111940_g39463_i0 PRJNA741997 40583 341 1.11194 3.7917154 Cucumispora dikerogammari 658444 Fungi Fungi 83.2 6.63e-17   NR KAF7700562.1 658444 g39463 i0 42 5.39296187683284 100 40 88 1 302 3 8 89 KAF7700562.1 Ras-related protein Rab2BV [Cucumispora dikerogammari] diamond 1839 83.2 1 Eukaryota Opisthokonta Fungi Microsporidia       Cucumispora Cucumispora dikerogammari
13952142 13952142 PRJNA741997_P_NODE_89971_length_241_cov_0.916667_g88851_i0 PRJNA741997 89971 241 0.916667 2.20916747 Eukaryota 2759 Fungi Fungi 279 9.14e-71   NTclustered gi|272477332|gb|FJ756014.1| 698107 g88851 i0 88.841 98.5477178423236 233 18 97 4 1 233 483 707 Microsporidium sp. BFAS6 small subunit ribosomal RNA gene, partial sequence blastn 23750 279 1 Eukaryota Opisthokonta Fungi Microsporidia       Microsporidium Microsporidium sp. BFAS6
22398829 22398829 PRJNA741997_P_NODE_29198_length_406_cov_1.387387_g28078_i0 PRJNA741997 29198 406 1.387387 5.63279122 Heterosporis sp. NBDP-2013a 1289055 Fungi Fungi 75 8.31e-9   NTclustered gi|448278458|gb|KC137554.1| 1289055 g28078 i0 95.652 0.113300492610837 46 2 11 0 33 78 2917 2962 Heterosporis sp. NBDP-2013a isolate MN/CISCO small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 46 75 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
23674520 23674520 PRJNA741997_P_NODE_45159_length_323_cov_1.084000_g44039_i0 PRJNA741997 45159 323 1.084 3.50132 Opisthokonta 33154 Fungi Fungi 107 1.42e-24   NR KAF7683634.1 164912 g44039 i0 62.2 8.46130030959752 90 31 82.7 3 55 321 135 222 KAF7683634.1 DNA-directed RNA polymerase II subunit RPB2 [Astathelohania contejeani] diamond 2733 108 0.990740740740741 Eukaryota Opisthokonta Fungi Microsporidia     Astathelohaniidae Astathelohania Astathelohania contejeani
26999209 26999209 PRJNA741997_P_NODE_58342_length_281_cov_2.221154_g57222_i0 PRJNA741997 58342 281 2.221154 6.24144274 Eukaryota 2759 Fungi Fungi 126 5.32e-33   NR XP_024330457.1 40302 g57222 i0 63 8.81850533807829 92 34 98.2 0 276 1 55 146 XP_024330457.1 dna repair protein rad51 [Vairimorpha ceranae] diamond 2478 127 0.992125984251969 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha ceranae
27873808 27873808 PRJNA741997_P_NODE_69205_length_256_cov_2.142077_g68085_i0 PRJNA741997 69205 256 2.142077 5.48371712 Enterocytozoon hepatopenaei 646526 Fungi Fungi 44.7 0.00694   NR OQS53680.1 646526 g68085 i0 39.7 1.546875 68 39 79.7 1 209 6 64 129 OQS53680.1 nero [Enterocytozoon hepatopenaei] diamond 396 44.7 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
28568329 28568329 PRJNA741997_P_NODE_22107_length_481_cov_2.674020_g20989_i0 PRJNA741997 22107 481 2.67402 12.8620362 Mitosporidium daphniae 1485682 Fungi Fungi 80.9 1.92e-16   NR XP_013237325.1 1485682 g20989 i0 58.3 0.854469854469854 72 30 44.9 0 28 243 1 72 XP_013237325.1 uncharacterized protein DI09_51p90 [Mitosporidium daphniae] diamond 411 80.9 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
28568368 28568368 PRJNA741997_P_NODE_63707_length_269_cov_1.571429_g62587_i0 PRJNA741997 63707 269 1.571429 4.22714401 Mitosporidium daphniae 1485682 Fungi Fungi 96.3 7.68e-21   NR XP_013239425.1 1485682 g62587 i0 52.8 0.992565055762082 89 42 99.3 0 2 268 511 599 XP_013239425.1 uncharacterized protein DI09_11p10 [Mitosporidium daphniae] diamond 267 96.3 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
28673347 28673347 PRJNA741997_P_NODE_47807_length_313_cov_1.279167_g46687_i0 PRJNA741997 47807 313 1.279167 4.00379271 Opisthokonta 33154 Fungi Fungi 62 6.86e-9   NR KAG5858651.1 27973 g46687 i0 33.3 2.69329073482428 72 40 69 1 302 87 29 92 KAG5858651.1 CHY zinc finger [Encephalitozoon hellem] diamond 843 62 1 Eukaryota Opisthokonta Fungi Microsporidia     Unikaryonidae Encephalitozoon Encephalitozoon hellem
31379872 31379872 PRJNA741997_P_NODE_66176_length_263_cov_2.378947_g65056_i0 PRJNA741997 66176 263 2.378947 6.25663061 Astathelohania contejeani 164912 Fungi Fungi 43.5 0.0249   NR KAF7678001.1 164912 g65056 i0 43.5 0.524714828897338 46 25 52.5 1 21 158 254 298 KAF7678001.1 putative cell cycle serine/threonine-protein kinase CDC5 like protein [Astathelohania contejeani] diamond 138 43.5 1 Eukaryota Opisthokonta Fungi Microsporidia     Astathelohaniidae Astathelohania Astathelohania contejeani
31379877 31379877 PRJNA741997_P_NODE_74836_length_249_cov_1.750000_g73716_i0 PRJNA741997 74836 249 1.75 4.3575 Pancytospora epiphaga 1938578 Fungi Fungi 47 0.00125   NR KAI5168486.1 1938578 g73716 i0 41.2 0.819277108433735 68 31 80.7 3 248 48 320 379 KAI5168486.1 hypothetical protein PAEPH01_0174 [Pancytospora epiphaga] diamond 204 47 1 Eukaryota Opisthokonta Fungi Microsporidia       Pancytospora Pancytospora epiphaga

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;